Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 158 1e-33
seq95291 145 9e-30
seq213462 122 1e-22
seq43961 122 1e-22
seq25697 107 2e-18
seq217609 96.9 4e-15
seq35455 86.0 7e-12
>seq80997
Length=4773
Score = 158 bits (174), Expect = 1e-33
Identities = 278/400 (70%), Gaps = 4/400 (1%)
Strand=Plus/Minus
Query 124634 GCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGT 124693
||| |||| |||||| |||||||||||||| || | | | ||||||||||
Sbjct 4733 GCTAAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCA 4674
Query 124694 CTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCA 124753
| |||||||| | | ||||| | |||||| | || | | | |||||||||
Sbjct 4673 CGACCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCG 4614
Query 124754 CCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCG 124813
|| || || ||||| |||||||||| |||||||||||||| || || || || | ||
Sbjct 4613 CCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCT 4554
Query 124814 ATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAA 124873
||||| || | |||| || |||||||| ||||| ||||| ||||| | | |||
Sbjct 4553 ATAGCCGCAGAAGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGAT 4494
Query 124874 CCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACG 124933
|| | || || || | || || || ||||| || ||||| || || ||||| || |
Sbjct 4493 CCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATA 4434
Query 124934 ATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAAC 124992
|| || ||| | | ||| || | ||| |||||||| | |||||||||||| ||||
Sbjct 4433 ATAAATACA-GAAGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAAT 4375
Query 124993 ATAAATTCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031
|||| | | | || | || | |||| ||| | ||||||
Sbjct 4374 GTAAAGAC-GATTTTCGGTGCTGGTTATCCAATTACAGAA 4336
>seq95291
Length=6073
Score = 145 bits (160), Expect = 9e-30
Identities = 277/403 (69%), Gaps = 4/403 (1%)
Strand=Plus/Plus
Query 124631 GGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCAC 124690
|| |||||||| |||||| |||||||||||||| || | | | |||||||||
Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720
Query 124691 TGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGA 124750
| | |||||||| | | ||||| | |||||| | || | | | |||||||
Sbjct 5721 TCACGACCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGA 5780
Query 124751 CCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGT 124810
|| || || || ||||| |||||||||| |||||||||||||| || || || || |
Sbjct 5781 CCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAA 5840
Query 124811 CCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAA 124870
|| ||||| || | |||| || |||||| | ||||| ||||| ||||| | | |
Sbjct 5841 CCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTAGA 5900
Query 124871 GAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCA 124930
|| || | || | || | || || || ||||| || ||||| || || ||||| ||
Sbjct 5901 GATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCG 5960
Query 124931 ACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACC 124989
| || || ||| | ||| || | ||| |||||||| | |||| ||||||| ||
Sbjct 5961 ATAATAAATACA-GAATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCATCC 6019
Query 124990 AACATAAATTCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031
|| |||| | | | || | || | |||| ||| | ||||||
Sbjct 6020 AATGTAAAGAC-GATTTTCGATGTTGGTTATCCAATTACAGAA 6061
>seq213462
Length=1170
Score = 122 bits (134), Expect = 1e-22
Identities = 151/205 (74%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| || ||||| ||||| ||||| || ||||| || || ||||||||||| ||||||||
Sbjct 899 TGGGCAGTGCAAATGTTGCTGGTAGCCTTGTCCCTCCTGATATGCTGCTCCCTAGTTTGC 958
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| ||| | || | |||| ||||| || |||||||| || | ||||| |
Sbjct 959 ATTGCCATCCTCAAAGCAGTCTTGCCGGTAGAATCAACACTGACT--CCAATGATTCTCC 1016
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
| || ||| | ||||| |||| | || ||| || ||||| || |||||||||||||| |
Sbjct 1017 CTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAAGAAAGCTGCATGAGGACCTCCAT 1076
Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519
| ||||| |||| |||||||| ||
Sbjct 1077 AGCCCATTGGAACTCCAAACCTCTG 1101
>seq43961
Length=9750
Score = 122 bits (134), Expect = 1e-22
Identities = 151/205 (74%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| || ||||| ||||| ||||| || ||||| || || ||||||||||| ||||||||
Sbjct 6802 TGGGCAGTGCAAATGTTGCTGGTAGCCTTGTCCCTCCTGATATGCTGCTCCCTAGTTTGC 6861
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| ||| | || | |||| ||||| || |||||||| || | ||||| |
Sbjct 6862 ATTGCCATCCTCAAAGCAGTCTTGCCGGTAGAATCAACACTGACT--CCAATGATTCTCC 6919
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
| || ||| | ||||| |||| | || ||| || ||||| || |||||||||||||| |
Sbjct 6920 CTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAAGAAAGCTGCATGAGGACCTCCAT 6979
Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519
| ||||| |||| |||||||| ||
Sbjct 6980 AGCCCATTGGAACTCCAAACCTCTG 7004
>seq25697
Length=5734
Score = 107 bits (118), Expect = 2e-18
Identities = 111/143 (78%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217
|| |||||||| | ||||| ||||||||||||||| | |||||| || || |||||
Sbjct 449 TAAAAATGGTGCCAAGTGTTTCTTTACACCAATAGGACCCATGCCAGGGCCACCTCCTCC 390
Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTC-AC 138276
||| ||||| ||||||||||| || | ||| |||||||| |||||||| || || | ||
Sbjct 389 ATGAGGAATGCAGAATGTCTTGTGGAGATTGAGATGACAAACATCTGCTCC-TATCCAAC 331
Query 138277 ATGGTTTTGCTAGACCTACCTGT 138299
||| ||| || || ||||||
Sbjct 330 CTGGGCTTGTGAGTCCCACCTGT 308
>seq217609
Length=1529
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| || ||||| ||||| ||||| || ||||| || | ||||||||||| ||||||||
Sbjct 1067 TGAGCAGTGCAAATGTTGCTGGTGGCCTTGTCCCTGCGGATATGCTGCTCCCTAGTTTGC 1126
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| || | |||| | || | || || || |||||| | || | || || |
Sbjct 1127 AAGGCCATTCTGAAAGCCGACTTTCCACAAGAATCAACACTGA--GCCCAATGATCCTTC 1184
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
|||| | | || ||||||| | || ||| || | ||| |||||||| ||||| || |
Sbjct 1185 CAGGCACCAACCTTTTATACTCTTGTGATGTGGCCAGGAACGCAGCATGTGGACCCCCAT 1244
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540
| ||||| |||| |||||||| || || || ||| |||||||
Sbjct 1245 AACCCATTGGAACCCCAAACCTCTGAGTAGACCCAACAACAATATC 1290
>seq35455
Length=35898
Score = 86.0 bits (94), Expect = 7e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217
|| |||||||| | ||||| ||| ||||||||||| | |||||| || || |||||
Sbjct 28745 TAAAAATGGTGCCAAGTGTTTCTTTACTCCAATAGGACCCATGCCAGGGCCACCTCCTCC 28686
Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269
||| || || || ||||| || || | ||| ||||| || |||||||| |||
Sbjct 28685 ATGAGGGATGCAAAATGTTTTGTGGAGATTCAGATGGCAAACATCTGCTCCA 28634
Score = 86.0 bits (94), Expect = 7e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217
|| |||||||| | ||||| ||| ||||||||||| | |||||| || || |||||
Sbjct 30070 TAAAAATGGTGCCAAGTGTTTCTTTACTCCAATAGGACCCATGCCAGGGCCACCTCCTCC 30011
Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269
||| || || || ||||| || || | ||| ||||| || |||||||| |||
Sbjct 30010 ATGAGGGATGCAAAATGTTTTGTGGAGATTCAGATGGCAAACATCTGCTCCA 29959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577376951168200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |