Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq80997 158 1e-33 seq95291 145 9e-30 seq213462 122 1e-22 seq43961 122 1e-22 seq25697 107 2e-18 seq217609 96.9 4e-15 seq35455 86.0 7e-12 >seq80997 Length=4773 Score = 158 bits (174), Expect = 1e-33 Identities = 278/400 (70%), Gaps = 4/400 (1%) Strand=Plus/Minus Query 124634 GCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGT 124693 ||| |||| |||||| |||||||||||||| || | | | |||||||||| Sbjct 4733 GCTAAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCA 4674 Query 124694 CTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCA 124753 | |||||||| | | ||||| | |||||| | || | | | ||||||||| Sbjct 4673 CGACCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCG 4614 Query 124754 CCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCG 124813 || || || ||||| |||||||||| |||||||||||||| || || || || | || Sbjct 4613 CCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCT 4554 Query 124814 ATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAA 124873 ||||| || | |||| || |||||||| ||||| ||||| ||||| | | ||| Sbjct 4553 ATAGCCGCAGAAGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGAT 4494 Query 124874 CCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACG 124933 || | || || || | || || || ||||| || ||||| || || ||||| || | Sbjct 4493 CCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATA 4434 Query 124934 ATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAAC 124992 || || ||| | | ||| || | ||| |||||||| | |||||||||||| |||| Sbjct 4433 ATAAATACA-GAAGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAAT 4375 Query 124993 ATAAATTCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031 |||| | | | || | || | |||| ||| | |||||| Sbjct 4374 GTAAAGAC-GATTTTCGGTGCTGGTTATCCAATTACAGAA 4336 >seq95291 Length=6073 Score = 145 bits (160), Expect = 9e-30 Identities = 277/403 (69%), Gaps = 4/403 (1%) Strand=Plus/Plus Query 124631 GGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCAC 124690 || |||||||| |||||| |||||||||||||| || | | | ||||||||| Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720 Query 124691 TGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGA 124750 | | |||||||| | | ||||| | |||||| | || | | | ||||||| Sbjct 5721 TCACGACCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGA 5780 Query 124751 CCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGT 124810 || || || || ||||| |||||||||| |||||||||||||| || || || || | Sbjct 5781 CCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAA 5840 Query 124811 CCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAA 124870 || ||||| || | |||| || |||||| | ||||| ||||| ||||| | | | Sbjct 5841 CCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTAGA 5900 Query 124871 GAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCA 124930 || || | || | || | || || || ||||| || ||||| || || ||||| || Sbjct 5901 GATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCG 5960 Query 124931 ACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACC 124989 | || || ||| | ||| || | ||| |||||||| | |||| ||||||| || Sbjct 5961 ATAATAAATACA-GAATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCATCC 6019 Query 124990 AACATAAATTCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031 || |||| | | | || | || | |||| ||| | |||||| Sbjct 6020 AATGTAAAGAC-GATTTTCGATGTTGGTTATCCAATTACAGAA 6061 >seq213462 Length=1170 Score = 122 bits (134), Expect = 1e-22 Identities = 151/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| || ||||| || || ||||||||||| |||||||| Sbjct 899 TGGGCAGTGCAAATGTTGCTGGTAGCCTTGTCCCTCCTGATATGCTGCTCCCTAGTTTGC 958 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434 | ||| | || | |||| ||||| || |||||||| || | ||||| | Sbjct 959 ATTGCCATCCTCAAAGCAGTCTTGCCGGTAGAATCAACACTGACT--CCAATGATTCTCC 1016 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| | ||||| |||| | || ||| || ||||| || |||||||||||||| | Sbjct 1017 CTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAAGAAAGCTGCATGAGGACCTCCAT 1076 Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519 | ||||| |||| |||||||| || Sbjct 1077 AGCCCATTGGAACTCCAAACCTCTG 1101 >seq43961 Length=9750 Score = 122 bits (134), Expect = 1e-22 Identities = 151/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| || ||||| || || ||||||||||| |||||||| Sbjct 6802 TGGGCAGTGCAAATGTTGCTGGTAGCCTTGTCCCTCCTGATATGCTGCTCCCTAGTTTGC 6861 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434 | ||| | || | |||| ||||| || |||||||| || | ||||| | Sbjct 6862 ATTGCCATCCTCAAAGCAGTCTTGCCGGTAGAATCAACACTGACT--CCAATGATTCTCC 6919 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| | ||||| |||| | || ||| || ||||| || |||||||||||||| | Sbjct 6920 CTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAAGAAAGCTGCATGAGGACCTCCAT 6979 Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519 | ||||| |||| |||||||| || Sbjct 6980 AGCCCATTGGAACTCCAAACCTCTG 7004 >seq25697 Length=5734 Score = 107 bits (118), Expect = 2e-18 Identities = 111/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||| ||||||||||||||| | |||||| || || ||||| Sbjct 449 TAAAAATGGTGCCAAGTGTTTCTTTACACCAATAGGACCCATGCCAGGGCCACCTCCTCC 390 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTC-AC 138276 ||| ||||| ||||||||||| || | ||| |||||||| |||||||| || || | || Sbjct 389 ATGAGGAATGCAGAATGTCTTGTGGAGATTGAGATGACAAACATCTGCTCC-TATCCAAC 331 Query 138277 ATGGTTTTGCTAGACCTACCTGT 138299 ||| ||| || || |||||| Sbjct 330 CTGGGCTTGTGAGTCCCACCTGT 308 >seq217609 Length=1529 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| || ||||| || | ||||||||||| |||||||| Sbjct 1067 TGAGCAGTGCAAATGTTGCTGGTGGCCTTGTCCCTGCGGATATGCTGCTCCCTAGTTTGC 1126 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434 | || | |||| | || | || || || |||||| | || | || || | Sbjct 1127 AAGGCCATTCTGAAAGCCGACTTTCCACAAGAATCAACACTGA--GCCCAATGATCCTTC 1184 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 |||| | | || ||||||| | || ||| || | ||| |||||||| ||||| || | Sbjct 1185 CAGGCACCAACCTTTTATACTCTTGTGATGTGGCCAGGAACGCAGCATGTGGACCCCCAT 1244 Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | ||||| |||| |||||||| || || || ||| ||||||| Sbjct 1245 AACCCATTGGAACCCCAAACCTCTGAGTAGACCCAACAACAATATC 1290 >seq35455 Length=35898 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||| ||| ||||||||||| | |||||| || || ||||| Sbjct 28745 TAAAAATGGTGCCAAGTGTTTCTTTACTCCAATAGGACCCATGCCAGGGCCACCTCCTCC 28686 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||| || || || ||||| || || | ||| ||||| || |||||||| ||| Sbjct 28685 ATGAGGGATGCAAAATGTTTTGTGGAGATTCAGATGGCAAACATCTGCTCCA 28634 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||| ||| ||||||||||| | |||||| || || ||||| Sbjct 30070 TAAAAATGGTGCCAAGTGTTTCTTTACTCCAATAGGACCCATGCCAGGGCCACCTCCTCC 30011 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||| || || || ||||| || || | ||| ||||| || |||||||| ||| Sbjct 30010 ATGAGGGATGCAAAATGTTTTGTGGAGATTCAGATGGCAAACATCTGCTCCA 29959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577376951168200