Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq80997 219 6e-52 seq95291 201 2e-46 seq13836 141 1e-28 seq55772 129 8e-25 seq78999 123 3e-23 >seq80997 Length=4773 Score = 219 bits (242), Expect = 6e-52 Identities = 319/442 (72%), Gaps = 8/442 (2%) Strand=Plus/Minus Query 27279 AGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGAT 27338 |||||||| | ||| || | | | || || | || |||| ||||||| ||| || Sbjct 4773 AGGATAGATCAAGAAAACAGTAGTAGCGGCTACAACAAGAGCTAAATATGCAACAGCAAT 4714 Query 27339 CCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCATAGAT 27398 ||| ||||||||||| | |||| | |||||||||||||| ||||| || ||| || | Sbjct 4713 CCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA-GCA-AGCT 4656 Query 27399 GC--CGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCACTCA 27456 | | | | |||||| | || | |||| ||||||| ||||| || ||||||||| Sbjct 4655 ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCACTCA 4596 Query 27457 TCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTTGGG 27516 || | || |||||||||||||| || || || || | ||| || || ||| | || Sbjct 4595 TCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGA 4536 Query 27517 ACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCACGA 27576 | || |||||||||||||| ||||| ||||| | || || |||| ||| || |||||| Sbjct 4535 ATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGA 4476 Query 27577 ATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGTTGC 27635 ||||| |||||||| || || || || ||||| || |||| ||| || |||| |||||| Sbjct 4475 ATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA-AGTTGC 4417 Query 27636 TGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTTAGT 27695 | || | || || ||||||| ||||| ||||| |||| || | ||| || || | Sbjct 4416 AGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATT-TTCGG 4358 Query 27696 TGAT-GTCACCCACTCACAGAA 27716 || | || | ||| | |||||| Sbjct 4357 TGCTGGTTATCCAATTACAGAA 4336 >seq95291 Length=6073 Score = 201 bits (222), Expect = 2e-46 Identities = 293/405 (72%), Gaps = 8/405 (2%) Strand=Plus/Plus Query 27316 GGAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCAC 27375 ||||| |||||||| ||| ||||| ||||||||||| | |||| | ||||||||| Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720 Query 27376 TCACGTCCCATATAAGCATAGATGC--CGATAAGGAAGTGGAAGACTACCAGTTGGAAAG 27433 ||||| ||||| || ||| || | | | | | |||||| | || | |||| ||| Sbjct 5721 TCACGACCCATGTA-GCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAG 5778 Query 27434 GACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGA 27493 |||| ||||| || ||||||||||| | || |||||||||||||| || || || || | Sbjct 5779 GACCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCA 5838 Query 27494 GACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAA 27553 ||| || || ||| | || | || |||||| ||||||| ||||| ||||| | | Sbjct 5839 AACCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTA 5898 Query 27554 GTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATG 27613 | || |||| ||| | ||||||||||| |||||||| || || || || ||||| || | Sbjct 5899 GAGATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAG 5958 Query 27614 CGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAA 27672 ||| ||| || |||| | |||| | || | || || ||||||| ||| | ||||| Sbjct 5959 CGATAATAAATACAGA-ATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCAT 6017 Query 27673 CCAACATACAAACGGTTGTTAGTTGAT-GTCACCCACTCACAGAA 27716 |||| || | ||| || || | || | || | ||| | |||||| Sbjct 6018 CCAATGTAAAGACGATT-TTCGATGTTGGTTATCCAATTACAGAA 6061 >seq13836 Length=10167 Score = 141 bits (156), Expect = 1e-28 Identities = 151/197 (77%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 23929 AACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGA 23988 |||| || |||||||||||| ||||| |||| ||||| || ||||||||| | || | Sbjct 4665 AACTTGGAGCAAAGAACCAACCAGACTGACCCAGTGGATAAATAAGGAATACAAAAACAA 4606 Query 23989 ATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGT 24047 | |||||||| ||||| || || || | ||||| || || || | | || ||| || Sbjct 4605 AAACAGCAATTGGACCTGAGAATGCGGTTGCATTATAAGGTCGCAATTGAAC-AGATCGA 4547 Query 24048 GCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACA 24107 || |||||||| ||||||||||| || ||||| | | | || |||||||||||||||||| Sbjct 4546 GCAAGTTCAAATTGACGTAACATGAACCCTATTAATCCGAAAGCACCGTGGAGAGCAACA 4487 Query 24108 AAGGACCAAAGCCCTCC 24124 || | ||| || || || Sbjct 4486 AAAGTCCACAGACCGCC 4470 >seq55772 Length=6464 Score = 129 bits (142), Expect = 8e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 32608 TCAGTAGAGTTTCTCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAAC 32667 ||||||||||| |||| | | ||||||||||| | ||| | ||||||||| | || Sbjct 1144 TCAGTAGAGTTCTCCTTCCTTGTGAGTTTCAATTACACAATCTGCAGTTGGATAGGAGAC 1203 Query 32668 ACAAGTGAGCACAAACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTG 32727 ||| || || | ||| |||||| | ||||| ||||| | ||| || |||| || Sbjct 1204 ACAGGTAAGTAGAAATCCTTCTCCCATTTGGGTGTCATCAAGGAATGAGCCATCAGACTG 1263 Query 32728 GTCTACTGTACCAGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGA 32787 || |||| |||||| |||||||| || ||||| | || || || || || || || || Sbjct 1264 ATCCACTGAACCAGAAACAATCTTCCCAGCACAGGTAGAGCATGCTCCGGCGCGGCACGA 1323 Query 32788 GTAGTTTAAATCAACCCCACCTTCCTCTGCTGCATCAAGGATGTATTGATCATC 32841 ||| | ||||| ||| | |||||||||||||| || ||||| |||||| Sbjct 1324 GTAAGGAAGTTCAACTCCAGCATCCTCTGCTGCATCTAGAATGTAGGTATCATC 1377 Score = 129 bits (142), Expect = 8e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 32608 TCAGTAGAGTTTCTCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAAC 32667 ||||||||||| |||| | | ||||||||||| | ||| | ||||||||| | || Sbjct 3612 TCAGTAGAGTTCTCCTTCCTTGTGAGTTTCAATTACACAATCTGCAGTTGGATAGGAGAC 3671 Query 32668 ACAAGTGAGCACAAACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTG 32727 ||| || || | ||| |||||| | ||||| ||||| | ||| || |||| || Sbjct 3672 ACAGGTAAGTAGAAATCCTTCTCCCATTTGGGTGTCATCAAGGAATGAGCCATCAGACTG 3731 Query 32728 GTCTACTGTACCAGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGA 32787 || | || ||||||||||||||| || ||||| | || || || || || || || || Sbjct 3732 ATCCAATGAACCAGATACAATCTTCCCAGCACAGGTAGAGCATGCTCCGGCGCGGCACGA 3791 Query 32788 GTAGTTTAAATCAACCCCACCTTCCTCTGCTGCATCAAGGATGTATTGATCATC 32841 ||| | ||||| ||| | |||||||||||||| || ||||| |||||| Sbjct 3792 GTAAGGAAGTTCAACTCCAGCATCCTCTGCTGCATCTAGAATGTAGGTATCATC 3845 >seq78999 Length=659 Score = 123 bits (136), Expect = 3e-23 Identities = 173/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| |||| | || | ||| || |||||| |||| |||||||| |||||| | | Sbjct 84 CATCCACCCACGAATACCTTCGTTTAAGAAAATACTTTTGGTGTAGAAAGTCTCAAAT-A 142 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGC 23578 | |||||| || ||||||| |||| | ||||| ||||||||||| || || || || Sbjct 143 AGGATCTTCTGCTCCACGAATTTCTTTAGAAACAAAGTCATAAGCACGTAGGTTTAGGGC 202 Query 23579 AAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAAA 23638 | | || | |||| || | || || | ||| | || || ||||| |||||| | Sbjct 203 CAAACTAACTACCCCAAAAGTAATGATCCGTAAACCAGTTACTGGTACAAATAACATACA 262 Query 23639 GAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATT 23698 ||| | ||||||| |||||| || |||||| ||||||| ||||||||| ||||| Sbjct 263 GAA-CGTAACCAACATTTATTGAAGAAAGCAACCTTAAAGATTTATGACCAAAAGCGATT 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663630724526200