Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 163 3e-35
seq95291 145 9e-30
>seq80997
Length=4773
Score = 163 bits (180), Expect = 3e-35
Identities = 252/360 (70%), Gaps = 0/360 (0%)
Strand=Plus/Minus
Query 8481 ATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACC 8540
|||||| ||| ||||| || | |||||| | || | | ||||||| | |||
Sbjct 4728 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACC 4669
Query 8541 CATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTT 8600
|||||| || | |||| | |||||| | | || | | ||| ||||| |||||
Sbjct 4668 CATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTT 4609
Query 8601 ATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGC 8660
|| ||||||||||| | | || |||||||| || ||||| || || || || |||||
Sbjct 4608 GTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGC 4549
Query 8661 GTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGC 8720
|||| |||| | |||||||| ||||| ||||||||||| | | || || |
Sbjct 4548 CGCAGAAGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGA 4489
Query 8721 AACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAA 8780
|||||| ||||||||||| || ||||| || || || ||||| ||||| || | |||||
Sbjct 4488 AACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAA 4429
Query 8781 GCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAG 8840
|| || |||| || || ||||||||| | ||| |||||||| || | |||||
Sbjct 4428 TACAGAAGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAG 4369
>seq95291
Length=6073
Score = 145 bits (160), Expect = 9e-30
Identities = 253/368 (69%), Gaps = 0/368 (0%)
Strand=Plus/Plus
Query 8473 GGAGCACTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCAC 8532
||||| |||||| ||| ||||| || | |||||| | || | | ||||||
Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720
Query 8533 TGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGA 8592
| | ||||||||| || | |||| | |||||| | | || | | ||| |||
Sbjct 5721 TCACGACCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGA 5780
Query 8593 CCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAAT 8652
|| ||||| || ||||||||||| | | || |||||||| || ||||| || || ||
Sbjct 5781 CCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAA 5840
Query 8653 CCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAAT 8712
|| ||||| |||| |||| | |||||| | ||||| ||||||||||| | |
Sbjct 5841 CCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTAGA 5900
Query 8713 GAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCC 8772
|| || | |||| | ||||||||||| || ||||| || || || ||||| ||||| ||
Sbjct 5901 GATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCG 5960
Query 8773 ACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCG 8832
| ||||| || | |||| || || ||||||||| | ||| ||||||| ||
Sbjct 5961 ATAATAAATACAGAATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCATCCA 6020
Query 8833 ACATAAAG 8840
| |||||
Sbjct 6021 ATGTAAAG 6028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614137715840200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |