Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 205 3e-48
seq95291 179 1e-40
>seq80997
Length=4773
Score = 205 bits (226), Expect = 3e-48
Identities = 315/447 (70%), Gaps = 2/447 (0%)
Strand=Plus/Plus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||| ||| | || || | || |||||||| |||| ||||||
Sbjct 4327 TGGGGTCGCTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTT 4386
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398
||||| |||||||||| | | | |||| || | ||| |||||| ||||||| ||
Sbjct 4387 GGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTAT 4445
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || ||
Sbjct 4446 CGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTA 4505
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
||| ||||| ||||| |||||||| | | |||| | || || || | |||||
Sbjct 4506 TGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTT 4565
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
||| ||||||||||||| | | |||| || ||| | ||||| ||||| |||||| |
Sbjct 4566 TTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGA 4625
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638
|| | || | |||||| | | ||| | | ||| |||| || || ||||||||
Sbjct 4626 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 4685
Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698
| | || || || ||| | || ||||| |||||| || | || | ||| | ||
Sbjct 4686 TAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGC 4745
Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCC 42725
|| ||| | || ||| | |||||||
Sbjct 4746 CGCTACTACTGTTTTCTTGATCTATCC 4772
>seq95291
Length=6073
Score = 179 bits (198), Expect = 1e-40
Identities = 288/411 (70%), Gaps = 2/411 (0%)
Strand=Plus/Minus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| ||| || ||||| ||| | || | | || |||||||| |||| ||||||
Sbjct 6070 TGGGGTCACTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTT 6011
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398
| ||| |||||||||| | | | |||| | | ||| |||||| ||||||| ||
Sbjct 6010 GATGTTTTGATGATTCCTACTTTATTGACTGCAAATTC-TGTATTTATTATCGCTTTTAT 5952
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
||||||||||| ||||| |||||||| |||||||| | ||| ||||| ||||| || ||
Sbjct 5951 CGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTA 5892
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
||| ||||| ||||| | |||||| | | |||| | || || || | |||||
Sbjct 5891 TGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTT 5832
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
||| ||||||||||||| | | |||| || ||| | ||||| ||||| |||||| |
Sbjct 5831 TTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGA 5772
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638
|| | || | |||||| | | ||| | | ||| |||| || || ||||||||
Sbjct 5771 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 5712
Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCC 42689
| | || || || ||| | || ||||| |||||| || || || ||
Sbjct 5711 TAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143150943096180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |