Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_020875.1
Length=182801
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 199 5e-46
seq95291 190 2e-43
>seq80997
Length=4773
Score = 199 bits (220), Expect = 5e-46
Identities = 254/350 (73%), Gaps = 0/350 (0%)
Strand=Plus/Plus
Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070
|| ||||| |||||| | ||||| ||| | | |||| || | || ||| ||
Sbjct 4378 GGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATC 4437
Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130
|| || || ||||| ||||| ||||| ||||||||||||||||| || || |||| |||
Sbjct 4438 GCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCT 4497
Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190
|| | ||||| ||||| ||||| |||||||| || | |||| ||| || || |||
Sbjct 4498 CTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGT 4557
Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250
| || || ||||| || ||||||||||| || ||||||||||||| ||||| || |||
Sbjct 4558 TTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGT 4617
Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 155310
|||| |||| | || | |||||| | | || | | ||| |||||| ||
Sbjct 4618 CCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAG 4677
Query 155311 TGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATA 155360
||||||||| || ||||| || |||||||||||||| |||||||||
Sbjct 4678 TGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATA 4727
>seq95291
Length=6073
Score = 190 bits (210), Expect = 2e-43
Identities = 227/308 (74%), Gaps = 0/308 (0%)
Strand=Plus/Minus
Query 155062 TTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTC 155121
|| ||| |||| || || ||||| ||||| ||||| ||||||||||||||||| | ||
Sbjct 5968 TTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTT 5909
Query 155122 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAAC 155181
|||| ||| || | ||||| ||||| ||||| | |||||| || | |||| |||
Sbjct 5908 TCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCG 5849
Query 155182 GCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTAC 155241
|| || ||| | || || ||||| || ||||||||||| || ||||||||||||| |||
Sbjct 5848 GCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATAC 5789
Query 155242 AATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT 155301
|| || ||||||| |||| | || | |||||| | | || | | |||
Sbjct 5788 AACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG 5729
Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361
|||||| ||||||||||| || ||||| || |||||||||||||| |||||||||
Sbjct 5728 GGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 5669
Query 155362 TCTGCACC 155369
|| || ||
Sbjct 5668 TCAGCTCC 5661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583197405574600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |