Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq80997 197 2e-45 seq95291 181 1e-40 >seq80997 Length=4773 Score = 197 bits (218), Expect = 2e-45 Identities = 292/414 (71%), Gaps = 0/414 (0%) Strand=Plus/Minus Query 67907 AGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGAT 67966 |||||||| |||||| |||| || || || |||| | ||||| ||| || Sbjct 4773 AGGATAGATCAAGAAAACAGTAGTAGCGGCTACAACAAGAGCTAAATATGCAACAGCAAT 4714 Query 67967 CCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGAT 68026 ||||||||||||||| ||||| || ||||||||||| |||||| ||| | | Sbjct 4713 CCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAGCAAGCTAC 4654 Query 68027 TCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATC 68086 || | | |||||| | || | |||| |||| || || || || ||||||||||| Sbjct 4653 ACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCACTCATC 4594 Query 68087 TAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAAC 68146 | || |||||||||||||| ||||| || || | ||| || || ||| |||||| Sbjct 4593 AACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAAT 4534 Query 68147 AACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGAT 68206 || |||||||||||||| ||||| || || | || || || | |||||| || | || Sbjct 4533 AATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGAAT 4474 Query 68207 ACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCTGCTGC 68266 |||||| ||||| |||||||| || || || || || || || || || | ||| | Sbjct 4473 ACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGAAGTTGCAGT 4414 Query 68267 GAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTC 68320 | || |||||||||||| ||||| ||||| |||| || | ||||| || Sbjct 4413 CAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTC 4360 >seq95291 Length=6073 Score = 181 bits (200), Expect = 1e-40 Identities = 279/398 (70%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 67944 GGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCAC 68003 ||||| || ||||| ||| ||||||||||||||||| ||||| || |||||||||| Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720 Query 68004 TGACGACCACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGT 68063 | |||||| ||| | | || | | |||||| | || | |||| |||| Sbjct 5721 TCACGACCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGA 5780 Query 68064 CCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGA 68123 || || || || ||||||||||| | || |||||||||||||| ||||| || || | | Sbjct 5781 CCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAA 5840 Query 68124 CCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGC 68183 || || || ||| |||||| || |||||| ||||||| ||||| || || | || Sbjct 5841 CCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTAGA 5900 Query 68184 GAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCA 68243 || || | |||| | || | |||||||| ||||| |||||||| || || || || || Sbjct 5901 GATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCG 5960 Query 68244 ATGATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCA 68303 || || || || ||| | | || |||||||||||| ||| | ||||| ||| Sbjct 5961 ATAATAAATACAGAATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCATCCA 6020 Query 68304 ACATAGATGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 | || | ||||| || | ||| | ||| ||||| Sbjct 6021 ATGTAAAGACGATTTTCGATGTTGGTTATCCAATTACA 6058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565359499800600