Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 269 3e-67
seq95291 237 2e-57
seq78999 129 7e-25
seq13836 125 8e-24
>seq80997
Length=4773
Score = 269 bits (298), Expect = 3e-67
Identities = 315/420 (75%), Gaps = 4/420 (1%)
Strand=Plus/Minus
Query 68388 AGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGAT 68447
|||||||| || ||| || | | || ||| ||||| | || | ||||||||| ||
Sbjct 4773 AGGATAGATCAAGAAAACAGTAGTAGCGGCTACAACAAGAGCTAAATATGCAACAGCAAT 4714
Query 68448 CCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCAAAG-A 68506
||||||||||||||| |||||| | ||||||||| ||||| |||||||| |||| |
Sbjct 4713 CCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA-GCAAGCTA 4655
Query 68507 TACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCACTCAT 68566
||||| | |||||| | | | |||| ||||||| || ||||| ||||||||||
Sbjct 4654 CACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCACTCAT 4595
Query 68567 CAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTAGGAA 68626
||| | ||||||||||| || |||||||| || | ||| || || ||| ||||||
Sbjct 4594 CAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAA 4535
Query 68627 CAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCACGAA 68686
|| |||||||||||||| ||||| ||||| || || || |||| |||||| |||||||
Sbjct 4534 TAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGAA 4475
Query 68687 TACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGTTGCT 68745
||||||| || || || || || |||||||| || |||| || || ||||| |||||
Sbjct 4474 TACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA-AGTTGCA 4416
Query 68746 GCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTCTGTG 68805
| | | ||||| ||||||| || || ||||| |||| |||||| || || || |||
Sbjct 4415 GTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGTG 4356
>seq95291
Length=6073
Score = 237 bits (262), Expect = 2e-57
Identities = 283/379 (75%), Gaps = 4/379 (1%)
Strand=Plus/Plus
Query 68425 GGTGCAGAGTATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCAT 68484
|| || || ||||||||| ||||||||||||||||| |||||| | |||||||||
Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720
Query 68485 TCACGTCCCATGTATGCAA-AGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGG 68543
||||| |||||||| |||| | ||||| | |||||| | | | |||| ||||
Sbjct 5721 TCACGACCCATGTA-GCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGG 5779
Query 68544 ACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAG 68603
||| || ||||| ||||||||||||| | ||||||||||| || |||||||| || |
Sbjct 5780 ACCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAA 5839
Query 68604 ACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAG 68663
||| || || ||| |||||| || |||||| ||||||| ||||| ||||| || ||
Sbjct 5840 ACCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTAG 5899
Query 68664 TGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGC 68723
|| |||| |||| | |||||||||||||| || || || || || |||||||| || ||
Sbjct 5900 AGATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGC 5959
Query 68724 GACGATGAA-ACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAAC 68782
|| || || ||||| |||| | | | ||||| ||||||| || | ||||| |
Sbjct 5960 GATAATAAATACAGA-ATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCATC 6018
Query 68783 CAACGTAAAGGCGGTTCTC 68801
||| |||||| || || ||
Sbjct 6019 CAATGTAAAGACGATTTTC 6037
>seq78999
Length=659
Score = 129 bits (142), Expect = 7e-25
Identities = 218/313 (70%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| | || ||| | || ||||| |||| | ||||| || ||||||||| | |
Sbjct 11 ATTAAAGAGTGTTTCCATGTGGTAGAACCTCTTTAGCGAATATAAGGTTTTCATGAAGCT 70
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705
||| | | ||| ||| |||||| |||||| || || | ||| | || |||||||
Sbjct 71 AATCTTGAACTCCCATCCACCCACGAATACCTTCGTTTAAGAAAATACTTTTGGTGTAGA 130
Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765
| ||||| || | || ||||||||| | | || |||| || ||||||||||||||||
Sbjct 131 AAGTCTCAAA-TAAGGATCTTCTGCTCCACGAATTTCTTTAGAAACAAAGTCATAAGCAC 189
Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825
| ||||| || || | || || | || | | | | ||| | ||| | || || |
Sbjct 190 GTAGGTTTAGGGCCAAACTAACTACCCCAAAAGTAATGATCCGTAAACCAGTTACTGGTA 249
Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885
|||| |||||| || || | ||||| | |||||| || |||| |||||| | |
Sbjct 250 CAAATAACATACAG-AACGTAACCAACATTTATTGAAGAAAGCAACCTTAAAGATTTATG 308
Query 66886 ACCAGAAGCGGTT 66898
|||| ||||| ||
Sbjct 309 ACCAAAAGCGATT 321
>seq13836
Length=10167
Score = 125 bits (138), Expect = 8e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 67133 TGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAAC 67192
|||||| || ||||||| || |||||||| || || || || || ||| |||||||||
Sbjct 4661 TGGAGCAAAGAACCAACCAGACTGACCCAGTGGATAAATAAGGAATACAAAAACAAAAAC 4602
Query 67193 AGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCA 67251
||| || ||||| ||||| || | ||||| || || || | | || ||| || || |
Sbjct 4601 AGCAATTGGACCTGAGAATGCGGTTGCATTATAAGGTCGCA-ATTGAACAGATCGAGCAA 4543
Query 67252 GTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAAT 67311
||||||| || || | |||||| || |||| ||||||| |||||||| || ||||||
Sbjct 4542 GTTCAAATTGACGTAACATGAACCCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAG 4483
Query 67312 TCCAGAGTCCTCC 67324
|||| || || ||
Sbjct 4482 TCCACAGACCGCC 4470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570452397406200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |