Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 109 8e-19
seq44648 104 3e-17
>seq39107
Length=55737
Score = 109 bits (120), Expect = 8e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||| |||||||||||||| || || || ||| ||||
Sbjct 16779 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 16838
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || || || ||||| || ||||| || || || ||||| ||
Sbjct 16839 GATACCATTGACAATGTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACCAG 16898
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||| | || | ||| || |||||||| |||||| | || | | ||||||||
Sbjct 16899 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACACTTGCTGATTATAAC 16958
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
|| || || | || |||||||| ||||||||
Sbjct 16959 ATCCAGAAGGAATCCACTCTTCATTTGGTGTTAAG 16993
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| ||||| ||||||||||| || | || || ||| |||
Sbjct 26097 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 26156
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || ||||| ||| || || || |||||||| || ||||| || ||
Sbjct 26157 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 26216
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| || ||||| || || || || ||||| | | ||||| ||
Sbjct 26217 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 26276
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTG 156032
|| || ||| ||| | ||||| || || |||
Sbjct 26277 AT-TCAAAAGGAGTCCACGCTCCACTTGGTG 26306
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||| |||||||||||||| || || || ||| ||||
Sbjct 26553 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 26612
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || || || ||||| || ||||| || || || ||||| ||
Sbjct 26613 GATACCATTGACAATGTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACCAG 26672
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||| | || | ||| || |||||||| |||||| |||| | | ||||||||
Sbjct 26673 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAAC 26732
Query 156003 AT 156004
||
Sbjct 26733 AT 26734
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| ||||| ||||||||||| || | || || ||| |||
Sbjct 29420 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 29479
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || ||||| ||| || || || |||||||| || ||||| || ||
Sbjct 29480 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 29539
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| || ||||| || || || || ||||| | | ||||| ||
Sbjct 29540 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 29599
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTG 156032
|| || ||| ||| | ||||| || || |||
Sbjct 29600 AT-TCAAAAGGAGTCCACGCTCCACTTGGTG 29629
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||| |||||||||||||| || || || ||| ||||
Sbjct 41390 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 41449
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || || || ||||| || ||||| || || || ||||| ||
Sbjct 41450 GATACCATTGACAATGTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACCAG 41509
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||| | || | ||| || |||||||| |||||| |||| | | ||||||||
Sbjct 41510 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAAC 41569
Query 156003 AT 156004
||
Sbjct 41570 AT 41571
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| ||||| ||||||||||| || | || || ||| |||
Sbjct 46351 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 46410
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || ||||| ||| || || || |||||||| || ||||| || ||
Sbjct 46411 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 46470
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| || ||||| || || || || ||||| | | ||||| ||
Sbjct 46471 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 46530
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTG 156032
|| || ||| ||| | ||||| || || |||
Sbjct 46531 AT-TCAAAAGGAGTCCACGCTCCACTTGGTG 46560
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||| |||||||||||||| || || || ||| ||||
Sbjct 29876 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 29935
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || || || || || || ||||| || || || ||||| ||
Sbjct 29936 GATACCATTGATAATGTAAAGGCAAAGATCCAGGACAAAGAGGGTATTCCACCAGACCAG 29995
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||| | || | ||| || |||||||| |||||| |||| | | ||||||||
Sbjct 29996 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAAC 30055
Query 156003 AT 156004
||
Sbjct 30056 AT 30057
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||||||| || || ||||| | || ||||| |||
Sbjct 43543 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTCGAGAGTTCA 43602
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || |||||| || || || ||||| || || || || ||||| ||
Sbjct 43603 GATACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 43662
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | ||||| || ||||| |||||| |||||| | | |||||||||
Sbjct 43663 CAGAGGCTTATCTTCGCCGGGAAACAGCTTGAAGATGGAAGAACTCTTGCGGATTATAAT 43722
Query 156003 AT 156004
||
Sbjct 43723 AT 43724
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||||||| || || ||||| | || ||||| |||
Sbjct 48553 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTCGAGAGTTCA 48612
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || |||||| || || || ||||| || || || || ||||| ||
Sbjct 48613 GATACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 48672
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | ||||| || ||||| |||||| |||||| | | |||||||||
Sbjct 48673 CAGAGGCTTATCTTCGCCGGGAAACAGCTTGAAGATGGAAGAACTCTTGCGGATTATAAT 48732
Query 156003 AT 156004
||
Sbjct 48733 AT 48734
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||||||| || || ||||| | || ||||| |||
Sbjct 49816 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTCGAGAGTTCA 49875
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || |||||| || || || ||||| || || || || ||||| ||
Sbjct 49876 GATACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 49935
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | ||||| || ||||| |||||| |||||| | | |||||||||
Sbjct 49936 CAGAGGCTTATCTTCGCCGGGAAACAGCTTGAAGATGGAAGAACTCTTGCGGATTATAAT 49995
Query 156003 AT 156004
||
Sbjct 49996 AT 49997
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || ||||||||||| || || || || |||
Sbjct 16551 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 16610
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| || || || ||||| || || || || ||||| ||
Sbjct 16611 GATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 16670
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | |||||| || ||||| |||||| ||||| | | ||||||||
Sbjct 16671 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAC 16730
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
|| ||||| | || || || || || || ||
Sbjct 16731 ATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 16765
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || ||||||||||| || || || || |||
Sbjct 26325 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 26384
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| || || || ||||| || || || || ||||| ||
Sbjct 26385 GATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 26444
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | |||||| || ||||| |||||| ||||| | | ||||||||
Sbjct 26445 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAC 26504
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
|| ||||| | || || || || || || ||
Sbjct 26505 ATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 26539
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || ||||||||||| || || || || |||
Sbjct 29648 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 29707
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| || || || ||||| || || || || ||||| ||
Sbjct 29708 GATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 29767
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | |||||| || ||||| |||||| ||||| | | ||||||||
Sbjct 29768 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAC 29827
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
|| ||||| | || || || || || || ||
Sbjct 29828 ATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 29862
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || ||||||||||| || || || || |||
Sbjct 46579 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 46638
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| || || || ||||| || || || || ||||| ||
Sbjct 46639 GATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAG 46698
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | |||||| || ||||| |||||| ||||| | | ||||||||
Sbjct 46699 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAC 46758
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
|| ||||| | || || || || || || ||
Sbjct 46759 ATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 46793
>seq44648
Length=6574
Score = 104 bits (114), Expect = 3e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| | || || | ||||||||||||||||| || || ||||| |||
Sbjct 5310 AATGCAGATTTTTGTCAAGACTCTTACTGGAAAAACTATTACTTTGGAGGTCGAGAGTTC 5369
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| || ||||| || ||||| || || || ||||| |||||||| ||
Sbjct 5370 AGACACGATTGACAATGTGAAGGCAAAGATACAGGACAAGGAGGGCATTCCTCCAGATCA 5429
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||||| ||||||| ||| || |||||||| || ||| | ||| | | ||||| ||
Sbjct 5430 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACTCTGGCTGATTACAA 5489
Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026
|| || ||| | || ||||||
Sbjct 5490 CATTCAGAAGGAGTCCACTCTTCAT 5514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729822438206000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |