Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 127 4e-24
seq44648 118 2e-21
>seq39107
Length=55737
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| || | ||| | || || || | || | ||| || ||||| |||||
Sbjct 41163 ATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCG 41104
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | |||| |||| || | ||||||||||||||| ||||| || |||||||| ||
Sbjct 41103 GCAAGGGTTCTCCCATCCTCGAGTTGTTTACCAGCAAAAATTAACCTTTGTTGATCCGGA 41044
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || || || ||| || |||||| || | || |||||||||
Sbjct 41043 GGGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCT 40984
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || ||||| || ||||| || ||||| | ||| ||||||||
Sbjct 40983 ACTTCAAGGGTGATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 40934
Score = 104 bits (114), Expect = 5e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| ||||| || | ||| | || || || | || | ||| ||| || || || |||||
Sbjct 26326 ATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGA-ATGTTGTAATC 26268
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | |||| | | || || | |||||||||||| || || || ||||| ||||| ||
Sbjct 26267 AGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGG 26208
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||||||| || || || ||| || |||||| || | ||| || |||||
Sbjct 26207 AGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTC 26148
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || ||||| || || || ||||| | || || |||||
Sbjct 26147 CACCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 26097
Score = 104 bits (114), Expect = 5e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| ||||| || | ||| | || || || | || | ||| ||| || || || |||||
Sbjct 29649 ATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGA-ATGTTGTAATC 29591
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | |||| | | || || | |||||||||||| || || || ||||| ||||| ||
Sbjct 29590 AGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGG 29531
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||||||| || || || ||| || |||||| || | ||| || |||||
Sbjct 29530 AGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTC 29471
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || ||||| || || || ||||| | || || |||||
Sbjct 29470 CACCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 29420
Score = 104 bits (114), Expect = 5e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
||||| ||||| | | || | | |||| |||| ||||||||||||||| || | |||
Sbjct 43452 ATATTGTAATCGGCAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTC 43393
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|| ||||| || || || || ||||| ||||| || || || |||||| || | |
Sbjct 43392 TGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTA 43333
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
||||| || || || | || |||||||| |||||||| || || | ||| ||||||
Sbjct 43332 TCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGC 43273
Query 192535 AT 192536
||
Sbjct 43272 AT 43271
Score = 104 bits (114), Expect = 5e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| ||||| || | ||| | || || || | || | ||| ||| || || || |||||
Sbjct 46580 ATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGA-ATGTTGTAATC 46522
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | |||| | | || || | |||||||||||| || || || ||||| ||||| ||
Sbjct 46521 AGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGG 46462
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||||||| || || || ||| || |||||| || | ||| || |||||
Sbjct 46461 AGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTC 46402
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || ||||| || || || ||||| | || || |||||
Sbjct 46401 CACCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 46351
Score = 104 bits (114), Expect = 5e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| || | ||| | || || || | || | ||| || ||||| |||||
Sbjct 48554 ATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCG 48495
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || | | |||| |||| ||||||||||||||| || | ||||| ||||| ||
Sbjct 48494 GCAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGA 48435
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || || |||||| || | |||||| ||
Sbjct 48434 GGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCC 48375
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | || |||||||| |||||||| || || | ||| ||||||||
Sbjct 48374 ACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGCAT 48325
Score = 104 bits (114), Expect = 5e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| || | ||| | || || || | || | ||| || ||||| |||||
Sbjct 49817 ATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCG 49758
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || | | |||| |||| ||||||||||||||| || | ||||| ||||| ||
Sbjct 49757 GCAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGA 49698
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || || |||||| || | |||||| ||
Sbjct 49697 GGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCC 49638
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | || |||||||| |||||||| || || | ||| ||||||||
Sbjct 49637 ACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGCAT 49588
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | ||| | ||| || ||||| | ||| | || || ||| |||||||||
Sbjct 17008 ATACCCCCACGAAGCCTTAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCA 16949
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||| || |||| |||| || || ||||||||||| | || || || || |||
Sbjct 16948 GCAAGTGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGT 16889
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || ||||| || |||||||| || | ||| || |||
Sbjct 16888 GGAATACCCTCTTTGTCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCA 16829
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| ||||| || || | || || | ||| || |||||
Sbjct 16828 ACCTCCAAAGTAATAGTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 16779
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
||||| || || | || || || |||| |||||||| || || |||||||| | |||
Sbjct 17188 ATATTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCGGCAAAGATAAGCCTC 17129
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|||||||||||||| ||||| || || || || || || ||| |||||| || | |
Sbjct 17128 TGTTGATCAGGTGGGATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGTA 17069
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| || || || || | |||||||| || || || | || || | |||||| |||
Sbjct 17068 TCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCACAAATATTTGC 17009
Query 192535 AT 192536
||
Sbjct 17008 AT 17007
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||| | || || | || | ||||| || || ||| |||||||||
Sbjct 26782 ATTCCACCACGAAGCCTCAACACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCA 26723
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||||| |||| |||| || || ||||||||||| | || || || || |||
Sbjct 26722 GCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGT 26663
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || ||||| || |||||||| || | ||| || |||
Sbjct 26662 GGAATACCCTCTTTGTCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCA 26603
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| ||||| || || | || || | ||| || |||||
Sbjct 26602 ACCTCCAAAGTAATAGTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 26553
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||| | || || | || | ||||| || || ||| |||||||||
Sbjct 30105 ATTCCACCACGAAGCCTCAACACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCA 30046
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||||| |||| |||| || || ||||||||||| | || || || || |||
Sbjct 30045 GCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGT 29986
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || || || || ||||||||| || | ||| || |||
Sbjct 29985 GGAATACCCTCTTTGTCCTGGATCTTTGCCTTTACATTATCAATGGTATCAGAACTTTCA 29926
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| ||||| || || | || || | ||| || |||||
Sbjct 29925 ACCTCCAAAGTAATAGTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 29876
Score = 91.5 bits (100), Expect = 3e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| ||||||||||| |||||||| || | ||||| ||||| ||||| || || || |
Sbjct 30260 CATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCT 30201
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| ||||| || || ||| |||||| || | ||| || || || || | ||||
Sbjct 30200 TGTCTTGAATCTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAA 30141
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|||| || || || | || || | |||||||||||||
Sbjct 30140 TGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCATT 30103
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||| | || || | || | ||||| || || ||| |||||||||
Sbjct 41619 ATTCCACCACGAAGCCTCAACACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCA 41560
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||||| |||| |||| || || ||||||||||| | || || || || |||
Sbjct 41559 GCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGT 41500
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || ||||| || |||||||| || | ||| || |||
Sbjct 41499 GGAATACCCTCTTTGTCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCA 41440
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| ||||| || || | || || | ||| || |||||
Sbjct 41439 ACCTCCAAAGTAATAGTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 41390
Score = 87.8 bits (96), Expect = 4e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| ||||||||||| |||||||| || | ||||| ||||| ||||| || || || |
Sbjct 26937 CATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCT 26878
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| || || || || ||| |||||| || | ||| || || || || | ||||
Sbjct 26877 TGTCCTGAATCTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAA 26818
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|||| || || || | || || | |||||||||||||
Sbjct 26817 TGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCATT 26780
Score = 87.8 bits (96), Expect = 4e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| ||||||||||| |||||||| || | ||||| ||||| ||||| || || || |
Sbjct 41774 CATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCT 41715
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| || || || || ||| |||||| || | ||| || || || || | ||||
Sbjct 41714 TGTCCTGAATCTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAA 41655
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|||| || || || | || || | |||||||||||||
Sbjct 41654 TGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCATT 41617
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||||||||| | | |||| | |||| || | ||||| || || ||||| | ||
Sbjct 43725 GATATTATAATCCGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCT 43666
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||| || || || || || || || ||||| || || || ||| |||||| || |
Sbjct 43665 CTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGT 43606
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|||||| || || || || |||||||| || ||||| || || || | ||| || ||
Sbjct 43605 ATCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTG 43546
Query 192534 CAT 192536
|||
Sbjct 43545 CAT 43543
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||||||||| | | |||| | |||| || | ||||| || || ||||| | ||
Sbjct 48735 GATATTATAATCCGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCT 48676
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||| || || || || || || || ||||| || || || ||| |||||| || |
Sbjct 48675 CTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGT 48616
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|||||| || || || || |||||||| || ||||| || || || | ||| || ||
Sbjct 48615 ATCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTG 48556
Query 192534 CAT 192536
|||
Sbjct 48555 CAT 48553
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||||||||| | | |||| | |||| || | ||||| || || ||||| | ||
Sbjct 49998 GATATTATAATCCGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCT 49939
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||| || || || || || || || ||||| || || || ||| |||||| || |
Sbjct 49938 CTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGT 49879
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|||||| || || || || |||||||| || ||||| || || || | ||| || ||
Sbjct 49878 ATCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTG 49819
Query 192534 CAT 192536
|||
Sbjct 49818 CAT 49816
>seq44648
Length=6574
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | |||||| ||||| | || | || | |||||| || || |||||||
Sbjct 5765 CCACCACGAAGACGCAATACGAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCA 5706
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| || | |||| |||||||| || ||||||||||| || ||||| ||||| |||||
Sbjct 5705 AGAGTCCTACCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 5646
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| || || || ||||| || || ||| || | |||||| ||| ||
Sbjct 5645 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTATCAATTGTATCTGAGCTTTCAACC 5586
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| | ||| || || || || ||||| || || | ||| |||||||||
Sbjct 5585 TCCAAAGTTATAGTCTTTCCTGTTAAAGTCTTCACAAAGATCTGCATT 5538
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 2804 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 2745
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 2744 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 2685
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 2684 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 2625
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 2624 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 2575
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 3032 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 2973
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 2972 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 2913
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 2912 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 2853
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 2852 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 2803
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 3488 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3429
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 3428 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3369
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 3368 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3309
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 3308 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 3259
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 3716 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3657
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 3656 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3597
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 3596 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3537
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 3536 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 3487
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 3944 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3885
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 3884 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3825
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 3824 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3765
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 3764 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 3715
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 4400 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4341
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 4340 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4281
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 4280 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4221
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 4220 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 4171
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 4628 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4569
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 4568 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4509
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 4508 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4449
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 4448 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 4399
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 4856 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4797
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 4796 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4737
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 4736 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4677
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||| || |||||
Sbjct 4676 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 4627
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 3260 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3201
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 3200 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3141
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 3140 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3081
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || || || | || || | ||| || |||||
Sbjct 3080 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 3031
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 4172 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4113
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 4112 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4053
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 4052 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3993
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || || || | || || | ||| || |||||
Sbjct 3992 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 3943
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 5084 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 5025
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 5024 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4965
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 4964 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4905
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || || || | || || | ||| || |||||
Sbjct 4904 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 4855
Score = 105 bits (116), Expect = 1e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || || |||| |||| ||| || ||| || ||||||
Sbjct 2576 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 2517
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || ||||| | || || | ||| || ||||||||||| | |||||||| || |||
Sbjct 2516 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 2457
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || ||| || ||||| ||| | || || |||
Sbjct 2456 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 2397
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGT 192512
|| || || || ||||| || |||||
Sbjct 2396 ACCTCAAGGGTGATGGTCTTTCCAGT 2371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981654100922250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |