Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 118 2e-21
seq58197 105 1e-17
seq44648 100 5e-16
seq158136 93.3 8e-14
>seq39107
Length=55737
Score = 118 bits (130), Expect = 2e-21
Identities = 136/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| ||||| | | | || | || || | ||||||||||||||||||||| ||
Sbjct 41116 AATATTGTAATCGGCAAGGGTTCTCCCATCCTCGAGTTGTTTACCAGCAAAAATTAACCT 41057
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||||| || || || || || ||||| || || || ||| || |||||| || ||
Sbjct 41056 TTGTTGATCCGGAGGGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGT 40997
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
|| |||||||||||||| || || ||||| || ||||| || ||||| | || |||||
Sbjct 40996 GTCAGACGATTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTG 40937
Query 172067 CAT 172069
|||
Sbjct 40936 CAT 40934
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || ||||| | | | || | |||| || | |||||||||||| ||||| || ||
Sbjct 26279 AATGTTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCT 26220
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || || || || |||||||| || || || ||| || |||||| || ||
Sbjct 26219 CTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGT 26160
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || ||||| || || || || || ||||| || || || ||||| | ||| || ||
Sbjct 26159 ATCAGAGGATTCCACCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTG 26100
Query 172067 CAT 172069
|||
Sbjct 26099 CAT 26097
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || ||||| | | | || | |||| || | |||||||||||| ||||| || ||
Sbjct 29602 AATGTTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCT 29543
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || || || || |||||||| || || || ||| || |||||| || ||
Sbjct 29542 CTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGT 29483
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || ||||| || || || || || ||||| || || || ||||| | ||| || ||
Sbjct 29482 ATCAGAGGATTCCACCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTG 29423
Query 172067 CAT 172069
|||
Sbjct 29422 CAT 29420
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || ||||| | | | || | |||| || | |||||||||||| ||||| || ||
Sbjct 46533 AATGTTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCT 46474
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || || || || |||||||| || || || ||| || |||||| || ||
Sbjct 46473 CTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGT 46414
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || ||||| || || || || || ||||| || || || ||||| | ||| || ||
Sbjct 46413 ATCAGAGGATTCCACCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTG 46354
Query 172067 CAT 172069
|||
Sbjct 46353 CAT 46351
Score = 100 bits (110), Expect = 5e-16
Identities = 134/184 (73%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATC 171945
|||||| ||||| | || | || ||| || |||| |||||||||||||||||| | |
Sbjct 43453 AATATTGTAATCGGC-AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCC 43395
Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005
|||| || || || || || || ||||| ||||| || || || |||||| || |
Sbjct 43394 TCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGG 43335
Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065
||||||| || || || | || |||||||| |||||||| || || | || ||||
Sbjct 43334 TATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCT 43275
Query 172066 GCAT 172069
||||
Sbjct 43274 GCAT 43271
Score = 100 bits (110), Expect = 5e-16
Identities = 134/184 (73%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATC 171945
|||||| ||||| | || | || ||| || |||| |||||||||||||||||| | |
Sbjct 48507 AATATTGTAATCGGC-AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCC 48449
Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005
|||| || || || || || || ||||| ||||| || || || |||||| || |
Sbjct 48448 TCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGG 48389
Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065
||||||| || || || | || |||||||| |||||||| || || | || ||||
Sbjct 48388 TATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCT 48329
Query 172066 GCAT 172069
||||
Sbjct 48328 GCAT 48325
Score = 100 bits (110), Expect = 5e-16
Identities = 134/184 (73%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATC 171945
|||||| ||||| | || | || ||| || |||| |||||||||||||||||| | |
Sbjct 49770 AATATTGTAATCGGC-AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCC 49712
Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005
|||| || || || || || || ||||| ||||| || || || |||||| || |
Sbjct 49711 TCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGG 49652
Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065
||||||| || || || | || |||||||| |||||||| || || | || ||||
Sbjct 49651 TATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCT 49592
Query 172066 GCAT 172069
||||
Sbjct 49591 GCAT 49588
Score = 89.7 bits (98), Expect = 9e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || || |||| || | || | || ||||||||||| ||||||||||| | ||
Sbjct 30286 AATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCT 30227
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || ||||| || || || || ||||| || || ||| |||||| || ||
Sbjct 30226 CTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTCACATTATCAATTGT 30167
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | |||||||| || || || | || || | ||||||||
Sbjct 30166 ATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTG 30107
Query 172067 CATT 172070
||||
Sbjct 30106 CATT 30103
Score = 84.2 bits (92), Expect = 4e-11
Identities = 129/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || || |||| || | || | || ||||||||||| ||||||||||| | ||
Sbjct 26963 AATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCT 26904
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || ||||| || || || || || || || || ||| |||||| || ||
Sbjct 26903 CTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGT 26844
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | |||||||| || || || | || || | ||||||||
Sbjct 26843 ATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTG 26784
Query 172067 CATT 172070
||||
Sbjct 26783 CATT 26780
Score = 84.2 bits (92), Expect = 4e-11
Identities = 129/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || || |||| || | || | || ||||||||||| ||||||||||| | ||
Sbjct 41800 AATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCT 41741
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || ||||| || || || || || || || || ||| |||||| || ||
Sbjct 41740 CTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGT 41681
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | |||||||| || || || | || || | ||||||||
Sbjct 41680 ATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTG 41621
Query 172067 CATT 172070
||||
Sbjct 41620 CATT 41617
>seq58197
Length=5457
Score = 105 bits (116), Expect = 1e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
||||| ||||||||||| | | || ||||| ||||| |||||||| || ||||| ||
Sbjct 5457 TGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATC 5398
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
||| |||||| ||| || |||||||| |||||||| ||||| ||||| |||||
Sbjct 5397 TTAGCTTTTACGTTATCAATGGTATCTGAGCTCTCTACTTCGAGAGTGATGGTCTTACCG 5338
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| | || |||| ||| || |||||
Sbjct 5337 GTGAGAGTCTTAACGAAGATTTGCAT 5312
>seq44648
Length=6574
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 2804 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 2745
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 2744 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 2685
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 2684 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 2625
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 2624 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 2575
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 3032 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 2973
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 2972 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 2913
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 2912 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 2853
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 2852 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 2803
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 3488 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3429
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 3428 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3369
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 3368 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3309
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 3308 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 3259
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 3716 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3657
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 3656 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3597
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 3596 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3537
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 3536 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 3487
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 3944 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3885
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 3884 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3825
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 3824 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3765
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 3764 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 3715
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 4400 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4341
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 4340 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4281
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 4280 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4221
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 4220 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 4171
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 4628 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4569
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 4568 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4509
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 4508 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4449
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 4448 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 4399
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 4856 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4797
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 4796 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4737
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 4736 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4677
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | || || | || || |||||
Sbjct 4676 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 4627
Score = 96.9 bits (106), Expect = 6e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 2576 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 2517
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 2516 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 2457
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 2456 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 2397
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045
|| || || || ||||| || |||||
Sbjct 2396 ACCTCAAGGGTGATGGTCTTTCCAGT 2371
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 3260 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 3201
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 3200 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 3141
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 3140 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3081
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || || || | || || | || || |||||
Sbjct 3080 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 3031
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 4172 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 4113
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 4112 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4053
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 4052 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 3993
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || || || | || || | || || |||||
Sbjct 3992 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 3943
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || |||| |||| ||| || || || |||||
Sbjct 5084 ATACCACCACGAAGACGCAGCACCAAGTGTAGGGTAGACTCCTTTTGGATGTTGTAATCA 5025
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| |||| || | ||| || |||||||| || | ||||||||||| |||
Sbjct 5024 GCCAAGGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGT 4965
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || ||||| || ||| || ||||| ||| || || || |||
Sbjct 4964 GGAATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCTATGGTGTCAGAGCTTTCC 4905
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || || || | || || | || || |||||
Sbjct 4904 ACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 4855
>seq158136
Length=352
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || ||||| | |||| |||||| ||| || |||||
Sbjct 250 ATACCACCACGGAGACGAAGCACCAAATGCAGGGTAGACTCTTTCTGAATGTTGTAATCG 191
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | ||| | || || | ||||| ||||||||||| | || || ||||| |||
Sbjct 190 GCAAGGGTTCGGCCATCCTCAAGCTGTTTTCCAGCAAAAATGAGCCTTTGCTGGTCTGGT 131
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| || || || ||| || ||||| || || || || |||
Sbjct 130 GGGATACCCTCTTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTTTCC 71
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| ||||| || || || || || ||||| || | || || ||||||
Sbjct 70 ACTTCAAGAGTGATTGTCTTTCCCGTCAATGTCTTCACAAAGATTTGCATT 20
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902601223203000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |