Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021301.1
Length=56279
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 518 1e-142
seq73813 86.0 2e-12
>seq24349
Length=3626
Score = 518 bits (574), Expect = 1e-142
Identities = 599/797 (75%), Gaps = 15/797 (2%)
Strand=Plus/Minus
Query 42909 GGTGATGCTCGGACAAGGCATGAACCTTCAGCAGGCACACACCTGCGTCTACATCGGCAT 42968
|||||||||||| || ||||||||||| |||||||| ||||| ||||| | ||||| |
Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241
Query 42969 TACCCACAAGTTCAACGACCTCATCCAGAGCGTGCACCGGATTCAACGGTTCGGCCA--A 43026
||| |||| ||||||||| |||||| ||||||||| || || || ||||| || |
Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181
Query 43027 ACCCACCCTTGCACCGCCCATCTCATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTC 43086
|||| ||| || || || ||| || |||||||||| || | | || | |
Sbjct 2180 GAGCACC--TGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGAC 2126
Query 43087 ATCCGC---GAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATT 43143
| || | | ||| |||| | | ||| || | || || |||| |||| | ||
Sbjct 2125 ACCCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATC 2066
Query 43144 CACGAGTACGGGCTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGC 43203
| ||||| ||| || |||||| || || || | || || ||| |||| || |
Sbjct 2065 CGCGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTC 2006
Query 43204 GAACGCATCGAAGCCTCTGGTGAGGGCTGGTTGTTCGCCAACAACGACTGCGTGCCCGAA 43263
|| ||| ||||||| || || |||||| | |||| ||||||||||||| |||
Sbjct 2005 GAGCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAG 1946
Query 43264 ACC-GAGTCCATG-GGCGACAG-CTCGGTGGACCTGATTGTCACCAGCATTCCGTTCTCC 43320
||| | | ||| ||| || | ||| || |||||||| ||||| || ||||||||
Sbjct 1945 ACCCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCG 1886
Query 43321 AACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCAT 43380
||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||
Sbjct 1885 AACCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCAC 1826
Query 43381 TTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCG-CCGGGCCG 43439
|||||| |||||||||||||||||| ||| |||| ||||| | || ||| || || ||
Sbjct 1825 TTCTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACG 1767
Query 43440 TATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGT 43499
||||| ||||||||||| ||||| || ||| |||||| ||||||||||| |||||| |
Sbjct 1766 GATCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCAT 1707
Query 43500 GCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCACGGCCGCAAACACGGCTTCGA 43559
||||| || || |||||||||||||| ||| || ||||||| ||| || ||||||||
Sbjct 1706 CCCCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGA 1647
Query 43560 CTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCG 43619
|||| | |||||||||||||| |||||| || ||||| || ||||||||||| |||||
Sbjct 1646 CTACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCG 1587
Query 43620 GCTGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATA 43679
|| |||| ||||| | |||| |||| ||| |||||||| |||||||| || || ||
Sbjct 1586 CCTCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTA 1527
Query 43680 CGTTCTGCTGTTCCACA 43696
| | ||||| |||||||
Sbjct 1526 CATCCTGCTCTTCCACA 1510
Score = 172 bits (190), Expect = 2e-38
Identities = 182/236 (77%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 42142 GGAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGCAAGCTGGACCCGAC-ACTG-T 42199
|| ||||| |||| ||||| ||||| || ||||||||| || | ||| | || | |
Sbjct 3193 GGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGCT 3136
Query 42200 TCACGGCCGTCTCACTCGATGAGGCATCCGTGCTGCGCTCGTTCGGGTCGAAGACCTACC 42259
|| || ||| ||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct 3135 TCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTACC 3076
Query 42260 AGTCGTTCCTGGAGCTGTTCGACGGCGTGCCCTATCGGTTTGTCGCCACCGCGACGCCGT 42319
|| |||||| | |||||||||| | || || || || || ||||||||||||||||
Sbjct 3075 AGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCGT 3016
Query 42320 CTCCGAATCGCTTCAAGGAGCTGATCCACTACGCGGGCTATCTCGGTGTGATGGAC 42375
| || || || ||||||||||||||||||||| || | ||||| | ||||||
Sbjct 3015 CACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
>seq73813
Length=1303
Score = 86.0 bits (94), Expect = 2e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 35403 GTTGCCAAGGACGTGTGCGAGGCCGCGGGGATTTCGAAGTACCGCGACGCGATCGTCCAA 35462
|| || ||||| |||||||| | || || | ||||| |||||||| ||| ||
Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATCGCCAAGTATCGCGACGCCTTCGCGCAG 118
Query 35463 CTGGACGACGACGAAAGGGTGTACCTGTTCGTGGACACCCCTGGCGGACCGCAACGCATG 35522
|| |||| ||||||||||| || | | ||||||||||| |||||||| || | |||
Sbjct 117 CTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGATG 58
Query 35523 GTCGCGGTCACCGAGGCAGGTGTGTGGTCACTGCTCATGATCAGCCGGTCACCGAAG 35579
| |||| |||| | ||||||| | ||| | | ||||| || || ||||||
Sbjct 57 ACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGAAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 179492401807470
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