Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021304.1
Length=51552
Score E
Sequences producing significant alignments: (Bits) Value
seq26502 309 1e-79
>seq26502
Length=2726
Score = 309 bits (342), Expect = 1e-79
Identities = 351/471 (75%), Gaps = 0/471 (0%)
Strand=Plus/Minus
Query 40172 GAGCGTGTCGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTC 40231
|||||||||||| | ||||||||| ||||| ||||||||||| || || || |||
Sbjct 2297 GAGCGTGTCGCCGCGGGCCAGCAGTTCGTAGACGGCGGGGTCGTCGAGACCGAGGTGCTC 2238
Query 40232 CAGGTCGACGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGT 40291
|| |||| | ||| || ||||| | ||||||||| |||| |||||| ||||||||
Sbjct 2237 GAGATCGAGCTCCTCGCCCCGGTTCATGCGGATGTTGTCGAGCGCGTCCGAGATGATCGT 2178
Query 40292 GAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTA 40351
|||||||||||| || |||||||||||||| | ||| || || | |||||| ||| ||
Sbjct 2177 GAGGTTCCGGAGGCCCAGGAAGTCCATCTTGATCAGACCGAGGGACTCGCACGACGGATA 2118
Query 40352 GTCGAACTGCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGAC 40411
|||||||||||||| || ||||||||| ||| | | ||||||| |||||
Sbjct 2117 GTCGAACTGCGTGACGATCTGACCGTCCTGCTCGCGACGCATGATCGGGATGATGTCGAG 2058
Query 40412 CAGCGGCTCGTCGGACATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACC 40471
||| |||||| |||||||| || ||||| |||||||| ||| |||||| || ||
Sbjct 2057 CAGGGGCTCGGACGACATGATGACGCCGGCGGCGTGCACGCCCCACTGCCGCTTCAGCCC 1998
Query 40472 TTCGAGACCGAGCGCGGTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCC 40531
||||| ||||||||| ||||| |||| ||| || || ||||||| || || |
Sbjct 1997 CTCGAGGCCGAGCGCGCGGTCGAAGACCGTCTTCGCCTCGGGGTCGGTCTCGATGAGAGC 1938
Query 40532 CCGGATCTCGGCGGCCTCCTCGTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGG 40591
||||| |||| ||||||| ||| || |||||| ||| || ||| || |||||||||||
Sbjct 1937 CCGGAACTCGCTCGCCTCCTTGTAGCGCGGGTGCGCGGAGTCGAACATGCCGTCGAGGGG 1878
Query 40592 CATCGAGTTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCC 40642
||| || ||||| ||| | | || ||||||||| ||| ||| ||
Sbjct 1877 CATGTCCTTCCCCATGACGGCCGGGGGCATCGCCTTGGTGAGCCGCTCTCC 1827
Score = 183 bits (202), Expect = 1e-41
Identities = 148/179 (83%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 40783 GGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCT 40842
|||| |||||||||| ||||| |||||||| |||||||| || ||||| ||||||||||
Sbjct 1622 GGTCGTCGAAGTCGACGTCGAAGTCGGGCATCGACACGCGGTCCGGGTTGAGGAACCGCT 1563
Query 40843 CGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40902
||||||| || |||||||| || |||||||||||||||||| | | ||||||||||
Sbjct 1562 CGAAGATCAGACCGTGCTCGAGAGGGTCGAGGTCGGTGATCTTCATCGCATAGGCGACCA 1503
Query 40903 GCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAG 40961
|||||| || | ||||| ||||| || ||||||| || |||||| ||||| ||||||
Sbjct 1502 TCGAACCCGCACCGGAGCCGCGCCCCGGACCGACCCGGATGCCGTTGTCCTTGGCCCAG 1444
Score = 140 bits (154), Expect = 1e-28
Identities = 150/197 (76%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 39820 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTG---CCCATCGCCCGGCGAAGCAGGT 39876
|| ||| |||| |||| ||||| ||||||||| |||||||| ||||| || | ||
Sbjct 2718 CGTACTGCTTGTCCAG---CTCGGACTTCTTCTTCTTTCCCATCGCTCGGCGCAGGATGT 2662
Query 39877 CGGCCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTCCTGGT 39936
| |||||||||||| || ||||||||| ||| || | | | || ||||||||||
Sbjct 2661 CAGCCTGACCGAGGCTGAACCCGGCCACCTTCTGCGCGATCGCCATGACCTGCTCCTGGT 2602
Query 39937 AGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGT 39996
||||||||||| | ||| | ||||||||||| | || | ||| |||| ||||||||
Sbjct 2601 AGATGATGAGCCCGTAGGACTCCTCCAGGATCTCGGCGAGCGGCTCCGCCAGCTCGGGGT 2542
Query 39997 GGATCGGCGTGATCGCC 40013
||||||| |||||| ||
Sbjct 2541 GGATCGGGGTGATCTCC 2525
Score = 105 bits (116), Expect = 2e-18
Identities = 298/449 (66%), Gaps = 9/449 (2%)
Strand=Plus/Minus
Query 41333 CTGGACGCACAGCAGTGCATCGTGAGCGACCGACTCCTCGGCGGTGAC-GTAGTGGGAAT 41391
||| ||||||||||| || |||| ||| | | ||| | | |||| |||||| || |
Sbjct 973 CTGCACGCACAGCAGGGCCGCGTGGGCGTCGGCCTCGT-GCTGGTGGGTGTAGTGCGAGT 915
Query 41392 CGTTCGTGACCACCGGAGTGAGCGCGAGGTGCTTCCCGAGCCGGTACAGATCCTCGCGGA 41451
|||| || |||| | | || |||||| ||| |||| || ||||||| ||
Sbjct 914 CGTTGGTCGCCACGAGCGGGATGCCGAGGTCTTTCGCGAGACGCAGCAGATCCGTCATGA 855
Query 41452 CCCGGCGCTCGATCTCGATGCCGTGGTCCATCAGCTCCAGGAAGTACCGGTCACGCCCGA 41511
|||||||||||||| | |||||||||||| | ||| |||||| || ||||
Sbjct 854 CCCGGCGCTCGATCGACAGGCCGTGGTCCATGATCTCGGCGAAGTAGTTCTCCTTGCCGA 795
Query 41512 AGACCTCCAGGTACCGACCGGCCTCCTTCACGGCCTCGTCGTACTGCCCGAGGTTCAGCC 41571
||| ||| || || | || || ||| |||||||||| ||||| |||||
Sbjct 794 AGATGTCCTGGAACTCCGCTGCGGCCGCGCGGGCGGCGTCGTACTGGCCGAGCCGCAGCC 735
Query 41572 GGGTCATGATCGCACCGCCAGGACATCCGGTCGTGACGACCAGGCCCTCGTTGTGC-TCG 41630
| ||| | | | ||| || || || |||||| ||| || |||| | || | ||
Sbjct 734 GCGTCTGCACCTCTCCGGACGGGCACCCCGTCGTGGCGATGAGCCCCTTGCCGTACGTCT 675
Query 41631 GCGACCAGGTCGAAGTCCATGCGCGGGTACTTCCCG-AGCAGGCCCTCCTGGTACGACCG 41689
| || ||| ||| |||||| ||||| ||| | || | |||||| | |||| |
Sbjct 674 G-GAGCAGCTCGCGGTCCATACGCGG---CTTGAAGTAGTA-CCCCTCCATGCTCGACAG 620
Query 41690 CGAGCTGAGCTTCATGAGGTTGTGCAGGCCGGTCTTGTTCGTGGAGAGGATCGTGAGGTG 41749
|||||| ||| | ||||||||||| ||| | || || | || || | |||
Sbjct 619 CGAGCTCAGCCGGAAGAGGTTGTGCATGCCCTCCGTGCTCTGGCTCCACATGGTCATGTG 560
Query 41750 CGTGTACGCACCCCGACCGCTCACGTCGT 41778
|||||||| ||| ||| ||||||||
Sbjct 559 GGTGTACGCGCCCGAACCCGACACGTCGT 531
Score = 86.0 bits (94), Expect = 2e-12
Identities = 151/214 (71%), Gaps = 12/214 (6%)
Strand=Plus/Minus
Query 41834 CGGGGCCATGTACGCCTCGATGCCGATGATCGGCTTGACCCCAGCGGCCTGCGCCGAGGT 41893
||||| | ||||||||||| ||| | ||| ||||||| || ||| |||| | | |
Sbjct 399 CGGGGTGACGTACGCCTCGAGGCCCACGATGGGCTTGATGCCGGCGTTGCGCGCGGCGTT 340
Query 41894 GAAGAAGTCGTACGCACCGTGAAGGT--TGCCGTGGTCCGTCACTGCGACGGCAGGAGCA 41951
| |||| ||| |||| || |||||| | |||||||||||||| |||| || ||
Sbjct 339 GTAGAACTCGAACGC--CGCGAAGGTGTTCCCGTGGTCCGTCACCGCGATCGCCGGCATG 282
Query 41952 CCCT----GGCGGGCGACCTCGGCGACCATCTGCTTCATCCGAGCGGCCCCGTCGAGGAG 42007
|| | ||||| || ||| ||| |||| || ||| || ||||||||||| |
Sbjct 281 CCGTAATCGGCGGCCG-CCT--GCG-TCATCGCGTTGATCTTCGCAGCCCCGTCGAGCAT 226
Query 42008 GCTGTACTCGGAGTGGTTGTGCAGGTGGACGAAG 42041
||||||| ||| ||||||||||||||||
Sbjct 225 CGAGTACTCGCTGTGCACGTGCAGGTGGACGAAG 192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164406244318380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |