Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq25689 134 4e-26 seq95679 127 6e-24 seq91917 120 9e-22 seq12236 107 6e-18 seq7453 100 8e-16 seq92775 95.1 4e-14 seq34309 91.5 4e-13 seq212242 86.0 2e-11 seq88322 84.2 6e-11 seq15189 84.2 6e-11 >seq25689 Length=4009 Score = 134 bits (148), Expect = 4e-26 Identities = 228/325 (70%), Gaps = 4/325 (1%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 ||||||||||||||||| |||| |||| | || |||| ||| | | | || | Sbjct 3995 CCAACAGCATCAATTTCATCAACAAAAACAATGCATGGAGCATTCTCTTTGGCCTTCTTG 3936 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 ||||| || | || ||||| || |||| ||||||| |||| || ||||| |||||| | Sbjct 3935 AATAAATCGCGGACTCGGGAAGCACCAACACCAACAAACATCTCCACAAACTCAGAACCT 3876 Query 289150 GATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || | |||| | |||| ||| |||||| ||||| | ||| | || | ||||||||| Sbjct 3875 GAGA-TTGAGAAAAATGGGACACCTGCTTCACCTGCAATAGCCTTTGCTAAAAGTGTCTT 3817 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 || |||||||| || || | | ||||| || ||||||| |||||| ||| | Sbjct 3816 CCCAGTTCCAGGAGGACCAACAAGAAGAACACCTTTTGGTATGCGAGCCCCAACAGCAGT 3757 Query 289269 ATATTTCTCAGGGCTCTTTAA-AAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 || ||||| |||| ||||| |||||| || | ||| || || | || || |||| Sbjct 3756 GAATCTCTCA-GGCTTTTTAAGAAATTCCACCACCTCCATAAAATCCTGCTTAGCTTCAT 3698 Query 289328 CACATCCTGCTACATCAGCAAAAGT 289352 | ||| || ||||| |||| || Sbjct 3697 CCACTCCAGCAACATCGTCAAATGT 3673 >seq95679 Length=4182 Score = 127 bits (140), Expect = 6e-24 Identities = 347/517 (67%), Gaps = 32/517 (6%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 |||||||||||| |||| | | ||||||| || | || || | |||||| || || Sbjct 2224 CCTATCAAACCTGCCAGGTCTAAGCAATGCTGAATCAAGAATTTCAGGTCTGTTAGTGGC 2283 Query 288909 TGCCAATACAACAATAGATTCG---GTTTGCT-TAAATCCATCCATACTTGTTAAAATTT 288964 || ||| || || || | |||| | |||| |||||||| || | | | Sbjct 2284 AGC-AATG--ACTAT-GACGCCAGTGTTTCCAGTAAAACCATCCATTTCAGTGAGCAACT 2339 Query 288965 GATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATC-GCTCCtt 289023 |||| ||||||||||| |||||||||||| |||| |||| | | | |||| Sbjct 2340 GATTCAGTGTTTGTTCTCTTTCATCATTT---CCTC------CACCTATACCTGTTCCTC 2390 Query 289024 tttt--tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCG 289081 | || | || |||||||| || || |||||||| | || ||| || |||||||| | | Sbjct 2391 TCTTCCTTCCTACAGCATCTATCTCATCAATGAACACCAAACATGGTGAATTTTGCTTGG 2450 Query 289082 CA--ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAA 289139 | |||| || || || || || | || || || | ||| ||| |||| || | || Sbjct 2451 CCTTATTG--AACAAATCCCTGACCCTTGAGGCCCCTACACCCACAAACATCTCAATGAA 2508 Query 289140 TTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAG 289199 || || | |||| | ||| | || || || ||||| | |||| | ||||| Sbjct 2509 CTCTGATCCAGATAGGGAGAAGAAAGGAACCCCAGCCTCTCCTGCAATTGCCTTGGCCAG 2568 Query 289200 AAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCC-C 289258 | |||||| || || ||||| || || | | ||||| |||||||| | ||||| | | Sbjct 2569 CAATGTCTTTCCAGTCCCAGGAGGCCCTACCAGAAGAAC-CCCTTTGGGAATTTTGGCTC 2627 Query 289259 CA---GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCAT 289315 || ||||| | | ||||| ||| |||| || || || ||||| || | | || | Sbjct 2628 CAACGGCAGA---AAACTTCTCTGGGGTCTTCAAGAACTCAACAATCTCTTGGAAATCCT 2684 Query 289316 ATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || || |||||| |||||||||||| |||| || Sbjct 2685 GCTTGGCTTCATCAACTCCTGCTACATCCTCAAATGT 2721 >seq91917 Length=5127 Score = 120 bits (132), Expect = 9e-22 Identities = 232/340 (68%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597 |||||| || ||| |||||| || ||| ||||| |||||| ||| | | || | Sbjct 4518 ATTTCTAACAGTCCCATCATATTTAACCATGATGTCCTCCATAGCCTTTACCAGTCGCCT 4459 Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657 ||| || || |||||| ||| || || || || |||||||| ||||| | | |||||| Sbjct 4458 CTGGATGTACCCAGTTTCAGAGGTCTTCACGGCAGTATCAATAAGACCTTCCCTACCACC 4399 Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717 ||| ||||| || || | ||||| || | ||| | | | | ||| |||| || || Sbjct 4398 CATGGCATGAAAAAAGAACTCTTGAGGGGTCAACCCTCGCAGATATGAGTTCTCCACAAA 4339 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCAT 302776 ||||| || ||| || || || || || || |||| ||||| | | | | Sbjct 4338 GCCACGACTTTCAGGCCCATAATCATCTTTTGTGAAATGAGGCAATGTCCTATCTATGA- 4280 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 | || ||||| || || || || ||||||||||| || |||| || | | |||| || | Sbjct 4279 ACCCATATGGAATTCGTTTACCCTCAACGTTCTGTTGGCCCACACAAGCAGTCATTTGAG 4220 Query 302837 AAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 | || || | | ||| || ||||| ||||| | ||||| Sbjct 4219 ATATGTTAATAAAACTTCCTTTGGAACCAGCTGTGACCAT 4180 >seq12236 Length=17685 Score = 107 bits (118), Expect = 6e-18 Identities = 322/488 (66%), Gaps = 22/488 (5%) Strand=Plus/Minus Query 288873 TAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCG-G 288931 ||| || | ||| | || || |||||||| |||||||| ||| ||||| ||| | | Sbjct 12111 TAAGGCAGAGTCAAGAATGTCTGCTCTGTTAGTTGCTGC-AATG--ACAAT-GATGCCAG 12056 Query 288932 TTTG---CTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCAT 288988 | | || ||| |||||||| ||| |||| ||| || || || || || ||||||| Sbjct 12055 TATTACCCTCAAAACCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCAT 11996 Query 288989 CATTTGAACCTCTTGAATCACCCGAATC--GCTCCtttttttA--CCAACAGCATCAATT 289044 |||| |||| |||| | || | |||| | | | ||||||||||||||| Sbjct 11995 CATTC---CCTC------CACCA-ATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATT 11946 Query 289045 TCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACA 289104 || |||| || | | || || | || | | | || | || || || | || Sbjct 11945 TCATCAACAAAGACAATGCAAGGGGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACT 11886 Query 289105 CGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAAT 289164 || || || |||| ||||||| |||| || ||||| |||||| | |||| | || ||| Sbjct 11885 CGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCAGATATTGAAAAAAAT 11826 Query 289165 GTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGT 289224 | ||| ||||| || || | ||| | |||| || ||||| || ||||| || || Sbjct 11825 GGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGA 11766 Query 289225 CCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTC 289284 || | | |||||||| || |||| |||||| ||| | | ||||||| || Sbjct 11765 CCAACAAGAAGAACTCCTTTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTC 11706 Query 289285 TTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCA 289344 || | ||| || || | ||| || || | || || ||||| || || |||||| Sbjct 11705 TTCAGAAACTCCACCACCTCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATCA 11646 Query 289345 GCAAAAGT 289352 |||| || Sbjct 11645 TCAAATGT 11638 Score = 107 bits (118), Expect = 6e-18 Identities = 336/511 (66%), Gaps = 22/511 (4%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||||| || | | ||| || | ||| | || || |||||||| |||||| Sbjct 16003 CTATCAAACCGTCCTGGTCTCAATAAGGCAGAGTCAAGAATGTCTGCTCTGTTAGTTGCT 15944 Query 288910 GCCAATACAACAATAGATTCG-GTTTG---CTTAAATCCATCCATACTTGTTAAAATTTG 288965 || ||| ||||| ||| | || | || ||| |||||||| ||| |||| ||| Sbjct 15943 GC-AATG--ACAAT-GATGCCAGTATTACCCTCAAAACCATCCATTTCTGTCAAAAGTTG 15888 Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATC--GCTCCtt 289023 || || || || || ||||||||||| |||| |||| | || | |||| Sbjct 15887 GTTGAGGGTCTGCTCTCTTTCATCATTC---CCTC------CACCA-ATTCCAGTTCCTC 15838 Query 289024 tttttA--CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCG 289081 | | | ||||||||||||||||| |||| || | | || || | || | | | | Sbjct 15837 TCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAAGGGGCGTTCTCTTTGG 15778 Query 289082 CAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATT 289141 | | || || || | || || || || |||| ||||||| |||| || ||||| | Sbjct 15777 CCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACT 15718 Query 289142 CAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 ||||| | |||| | || |||| ||| ||||| || || | ||| | |||| | Sbjct 15717 CAGAACCAGATATTGAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACA 15658 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAG 289261 | ||||| || ||||| || || || | | |||||||| || |||| |||||| Sbjct 15657 GGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTTAGGTATGCGAGCCCCAA 15598 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 ||| | | ||||||| |||| | ||| || || | ||| || || | || | Sbjct 15597 CAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTCCATAAAGTCCTGCTTGG 15538 Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | ||||| || || |||||| |||| || Sbjct 15537 CTTCATCCACCCCAGCAACATCATCAAATGT 15507 >seq7453 Length=18057 Score = 100 bits (110), Expect = 8e-16 Identities = 269/405 (66%), Gaps = 15/405 (4%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939 ||||| ||||| | || || ||| ||||||| ||||||| ||| |||| | Sbjct 14314 TCTAAGATATCAGGCCTATTCGTTCCTGCCAACACAACAACCCCAGAAGTGGTTCC---A 14370 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || | |||||| | ||| ||| | |||||||||||||| Sbjct 14371 AAGCCATCCATCTCCACCAACAATTGATTCAATGTACTTTCACGCTCATCATTTGAACC- 14429 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 ||| ||| | | |||| | ||||| |||||||| || ||||| || || Sbjct 14430 --AGAAAAACCACCACGCCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATT 14487 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAA 289117 | || |||| | || || || || | ||| || | ||| || | |||| ||||| Sbjct 14488 ATACTTGGAGCACACTGCCTTGC--TTCCAGAAACAAGTTTCTAACCCTTGATGGTCCAA 14545 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATG-AATGTTACATTTGCT 289176 ||||||| ||||||| | || |||||| | |||| | ||| | |||| || | Sbjct 14546 CACCAACAAACATTTCCATGAAATCAGAACCAGATA-TAGAAAGAAATGGCACTCCAGAC 14604 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || ||||| ||| | || | |||||| || ||||| || || || ||| | || ||| Sbjct 14605 TCCCCTGCAGTTGCTTTTGCTAAAAGTGTTTTTCCTGTACCCGGAGGACCCACCAACAGA 14664 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGG 289281 | || ||||| | |||||| || || |||||||| |||| Sbjct 14665 GCACCTTTTGGAATTTTTGCACCGAGTTCCTCATATTTCTTAGGG 14709 >seq92775 Length=3506 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/138 (76%), Gaps = 4/138 (3%) Strand=Plus/Minus Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 ||||||| | ||||| |||||||| || || | ||| ||||| | |||||||| ||| Sbjct 2091 TTGCAAAGAGATCTCTCACACGGGAAGCACCCATACCGACATATAACTCTACAAACTCAC 2032 Query 289145 AAGCGGAT--ACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| || |||| || |||| ||||| ||||| ||||| || ||| ||||||| | Sbjct 2031 TAGCAGAACAACTT--ATAAATGGTACATCAGCTTCCCCTGCCACCGCCTTCGCCAGTAA 1974 Query 289203 TGTCTTACCTGTTCCAGG 289220 ||||||||||| ||||| Sbjct 1973 AGTCTTACCTGTCCCAGG 1956 >seq34309 Length=6153 Score = 91.5 bits (100), Expect = 4e-13 Identities = 195/286 (68%), Gaps = 14/286 (5%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939 ||||| ||||| | || |||||| ||||||| ||||||| ||| |||| | Sbjct 5657 TCTAAGATATCAGGCCTATTTGTTCCTGCCAAAACAACAACTCCAGAAGTGGTTCC---A 5713 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| ||| | |||||| | ||| ||| | |||||||||| ||| Sbjct 5714 AAACCATCCATCTCCACTAACAATTGATTCAATGTACTTTCACGCTCATCATTTGCACCA 5773 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 ||| ||| | | |||| | ||||| ||||||||||||||||| || || Sbjct 5774 ---GAAAAACCGCCACGCCCCCTTGCTCGACCAATTGCATCAATTTCGTCAATAAATATT 5830 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAA 289117 | || |||| | ||| || || || | ||| || | ||| || | |||| ||||| Sbjct 5831 ATACTAGGAGCACATTGCCTTGC--TTCCAGAAACAAATTTCTCACCCTTGATGGTCCAA 5888 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA 289163 ||||||| ||||||| | || |||||| | |||| | ||| ||| Sbjct 5889 CACCAACAAACATTTCCATGAAATCAGAACCAGATA-TAGAAAGAA 5933 >seq212242 Length=1104 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 ||||||||| ||||| |||||||| || || | ||||||||||| ||||| || ||| Sbjct 160 TTGCAAATAGATCTCTAACACGGGAGGCACCCATACCAACATACAACTCTACGAACTCAC 219 Query 289145 AAGCGGA--TACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| || |||| || |||| |||| ||||| || || || ||| | || || | Sbjct 220 TAGCAGAACAACTT--ATAAATGGCACATCAGCTTCCCCAGCCACAGCCTTTGCTAGTAA 277 Query 289203 TGTCTTACCTGTTCCAGG 289220 ||||||||||| ||||| Sbjct 278 AGTCTTACCTGTGCCAGG 295 >seq88322 Length=2502 Score = 84.2 bits (92), Expect = 6e-11 Identities = 82/105 (78%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||| || ||||| || ||||| || ||||| | |||||| |||| || Sbjct 1345 TACCTTTCCTCTTGCCTCCCCCCTGGTCAACATAGCGGGCAGTATCATTGAACACACGTA 1286 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATAT 156150 ||| |||| ||| || ||||| || ||||| || || ||||||| Sbjct 1285 ACATTGGAACAATGCCGTTGGACGTCCCATTTGTCCCACGAATAT 1241 >seq15189 Length=5727 Score = 84.2 bits (92), Expect = 6e-11 Identities = 82/105 (78%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||| || ||||| || ||||| || ||||| | |||||| |||| || Sbjct 2101 TACCTTTCCTCTTGCCTCCCCCCTGGTCAACATAGCGGGCAGTATCATTGAACACACGTA 2042 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATAT 156150 ||| |||| ||| || ||||| || ||||| || || ||||||| Sbjct 2041 ACATTGGAACAATGCCGTTGGACGTCCCATTTGTCCCACGAATAT 1997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467592823469795