Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq26502 309 1e-79
>seq26502
Length=2726
Score = 309 bits (342), Expect = 1e-79
Identities = 351/471 (75%), Gaps = 0/471 (0%)
Strand=Plus/Minus
Query 39632 GAGCGTGTCGCCCCTGGCCAGCAGCTCGTAGGTCGGGGCGTCGTCCAGAGGGATGTTCTC 39691
|||||||||||| | ||||||||| |||||| | || |||||| ||| || || |||
Sbjct 2297 GAGCGTGTCGCCGCGGGCCAGCAGTTCGTAGACGGCGGGGTCGTCGAGACCGAGGTGCTC 2238
Query 39692 CAGGTCGACGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGT 39751
|| |||| | ||| || ||||| | ||||||||| |||| |||||| ||||||||
Sbjct 2237 GAGATCGAGCTCCTCGCCCCGGTTCATGCGGATGTTGTCGAGCGCGTCCGAGATGATCGT 2178
Query 39752 GAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTA 39811
|||||||||||| || |||||||||||||| | ||| || || | |||||| ||| ||
Sbjct 2177 GAGGTTCCGGAGGCCCAGGAAGTCCATCTTGATCAGACCGAGGGACTCGCACGACGGATA 2118
Query 39812 GTCGAACTGCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGAC 39871
|||||||||||||| || ||||||||| ||| | | ||||||| |||||
Sbjct 2117 GTCGAACTGCGTGACGATCTGACCGTCCTGCTCGCGACGCATGATCGGGATGATGTCGAG 2058
Query 39872 CAGAGGCTCGTCGGACATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACC 39931
||| |||||| |||||||| || ||||| |||||||| ||| |||||| || ||
Sbjct 2057 CAGGGGCTCGGACGACATGATGACGCCGGCGGCGTGCACGCCCCACTGCCGCTTCAGCCC 1998
Query 39932 TTCGAGACCGAGCGCGGTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCC 39991
||||| ||||||||| ||||| |||| ||| || || ||||||| || || |
Sbjct 1997 CTCGAGGCCGAGCGCGCGGTCGAAGACCGTCTTCGCCTCGGGGTCGGTCTCGATGAGAGC 1938
Query 39992 CCGGATCTCGGCGGCCTCCTCGTACCGAGGGTGCTCGGCGTTGAAGATGCCTTCGAGGGG 40051
||||| |||| ||||||| ||| || |||||| ||| || ||| ||||| ||||||||
Sbjct 1937 CCGGAACTCGCTCGCCTCCTTGTAGCGCGGGTGCGCGGAGTCGAACATGCCGTCGAGGGG 1878
Query 40052 CATCGAGTTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCC 40102
||| || ||||| ||| | | || ||||||||| ||| ||| ||
Sbjct 1877 CATGTCCTTCCCCATGACGGCCGGGGGCATCGCCTTGGTGAGCCGCTCTCC 1827
Score = 174 bits (192), Expect = 5e-39
Identities = 146/179 (82%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 40243 GGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCT 40302
|||| |||||||||| ||||| |||||||| |||||||| || ||||| ||||| ||||
Sbjct 1622 GGTCGTCGAAGTCGACGTCGAAGTCGGGCATCGACACGCGGTCCGGGTTGAGGAACCGCT 1563
Query 40303 CGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40362
||||||| || |||||||| || |||||||||||||||||| | | ||||||||||
Sbjct 1562 CGAAGATCAGACCGTGCTCGAGAGGGTCGAGGTCGGTGATCTTCATCGCATAGGCGACCA 1503
Query 40363 GCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAG 40421
|||||| || | ||||| ||||| || ||||||| || ||||| ||||| ||||||
Sbjct 1502 TCGAACCCGCACCGGAGCCGCGCCCCGGACCGACCCGGATGCCGTTGTCCTTGGCCCAG 1444
Score = 127 bits (140), Expect = 7e-25
Identities = 147/197 (75%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 39280 CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTG---CCCATCGCCCGGCGAAGCAGGT 39336
|| ||| |||| |||| ||||| ||||||||| |||||||| ||||| || | ||
Sbjct 2718 CGTACTGCTTGTCCAG---CTCGGACTTCTTCTTCTTTCCCATCGCTCGGCGCAGGATGT 2662
Query 39337 CGGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGT 39396
| |||||||| ||| || ||||||||| ||| || | | | |||||||||||||
Sbjct 2661 CAGCCTGACCGAGGCTGAACCCGGCCACCTTCTGCGCGATCGCCATGACCTGCTCCTGGT 2602
Query 39397 AGATGATCAACTGGAATGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGT 39456
||||||| | | | | | | ||||||||||| | || | ||| |||| ||||||||
Sbjct 2601 AGATGATGAGCCCGTAGGACTCCTCCAGGATCTCGGCGAGCGGCTCCGCCAGCTCGGGGT 2542
Query 39457 GGATCGGCGTGATCGCC 39473
||||||| |||||| ||
Sbjct 2541 GGATCGGGGTGATCTCC 2525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162890288150130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |