Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021348.1
Length=156558
Score E
Sequences producing significant alignments: (Bits) Value
seq115444 84.2 2e-11
seq26502 84.2 2e-11
>seq115444
Length=225
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 96728 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 96787
||||| | ||||||||||||||||||| |||||||||||||||||| |||||| | |||
Sbjct 141 ATGCGGACGTAGCTCAGCTGGTAGAGCACCACCTTGCCAAGGTGGATGTCGCGAGTTCGA 82
Query 96788 AACCCGTTCTTCGCTC 96803
| | ||| | |||||
Sbjct 81 ATCTCGTCGTCCGCTC 66
>seq26502
Length=2726
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/147 (73%), Gaps = 4/147 (3%)
Strand=Plus/Plus
Query 114585 CGGCCCGGGCCGTGGCTCTGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 114644
||| ||||| || ||||| | | || ||| ||||| |||| | ||| ||||||
Sbjct 1471 CGGTCCGGGGCGCGGCTCCGGTGCGGGTTCGATGGTCGCCTATGCGATGAAGATCACCGA 1530
Query 114645 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGC--CCC 114702
||||||| || || ||| ||||| |||||||| || |||||||||||||| |
Sbjct 1531 CCTCGACCCTCTCGAGCACGGTCTGATCTTCGAGCGGTTCCTCAACCCGGACCGCGTGTC 1590
Query 114703 GACTTCCCCGACATCGACGTCGACTTC 114729
|| | |||||| ||||||||||||||
Sbjct 1591 GA--TGCCCGACTTCGACGTCGACTTC 1615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499454979594800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |