Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq80997 206 3e-48 seq95291 181 1e-40 seq55772 134 2e-26 seq13836 129 6e-25 seq152218 89.7 6e-13 seq32149 89.7 6e-13 seq78999 84.2 2e-11 seq76780 82.4 8e-11 >seq80997 Length=4773 Score = 206 bits (228), Expect = 3e-48 Identities = 314/441 (71%), Gaps = 6/441 (1%) Strand=Plus/Plus Query 157580 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 157639 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 157640 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 157698 |||||||| ||| | ||| | ||||| ||||| || || |||| || ||||||| || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 157699 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 157758 || || || || || || || ||||| || || |||| || || | ||||| ||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 157759 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 157818 ||||| |||||||| || | || |||| || || ||| | || || ||||| || Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 157819 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 157878 ||||||||| || || ||||||||||| | || ||||| ||||||| |||| | || Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 157879 ATTTCACTTCCTCATTG--GTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATAC 157936 | |||||| | ||| ||| || ||| |||||||| ||||||||||||||| | Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692 Query 157937 CGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCT 157996 ||| | |||||||| || ||||| ||| ||||||| |||| || | || || || Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACT 4752 Query 157997 GCTGTATTCCTCGTCTATCCT 158017 |||| ||| | |||||||| Sbjct 4753 ACTGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 181 bits (200), Expect = 1e-40 Identities = 261/362 (72%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 157622 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGT 157680 || ||||| | || |||||||||| ||| | ||| | |||| ||||| || || | Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961 Query 157681 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 157740 ||| || ||||||| || || || || || || || || ||||| | || |||| || Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901 Query 157741 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGG 157800 || | ||||| ||||| ||||| | |||||| || | || |||| || || || Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841 Query 157801 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 157860 | | || || ||||| ||||||||||| || || ||||||||||| | || ||||| || Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781 Query 157861 TCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTAT--CTATGCATACATGGGACGT 157918 ||||| |||| | || | |||||| | ||||| | || ||| |||||||| ||| Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGT 5723 Query 157919 GAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCT 157978 |||||||||||| | ||| | |||||||| || ||||| ||| |||||||| ||| Sbjct 5722 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 5663 Query 157979 CC 157980 || Sbjct 5662 CC 5661 >seq55772 Length=6464 Score = 134 bits (148), Expect = 2e-26 Identities = 168/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 158750 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 158809 ||||||||||| |||||||| || || |||||||| || |||||| || || || || Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309 Query 158810 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158869 || |||||| | ||||| || || ||||| ||||| | || |||||| |||| || Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249 Query 158870 TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158929 ||| | || || || || | || ||||||| | ||||| ||||| | |||||||| Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189 Query 158930 TCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAACCTCTACTGA 158974 | |||||||| ||| ||| | |||| ||||||| ||||||||| Sbjct 1188 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 1144 Score = 134 bits (148), Expect = 2e-26 Identities = 168/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 158750 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 158809 ||||||||||| |||||||| || || |||||||| || |||||| || || || || Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777 Query 158810 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158869 || |||||| | ||||| || || ||||||||||| | | |||||| |||| || Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717 Query 158870 TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158929 ||| | || || || || | || ||||||| | ||||| ||||| | |||||||| Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657 Query 158930 TCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAACCTCTACTGA 158974 | |||||||| ||| ||| | |||| ||||||| ||||||||| Sbjct 3656 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 3612 >seq13836 Length=10167 Score = 129 bits (142), Expect = 6e-25 Identities = 140/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 159582 TGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTT 159641 |||| |||||| || ||||||||||| |||| |||| || |||||| | ||||| ||| Sbjct 4479 TGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTACGTCAATTT 4538 Query 159642 GAACTGGCACG-TCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTAT 159700 ||||| || || ||| | | | || ||||| ||||| | || ||||| ||||| || Sbjct 4539 GAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTCAGGTCCAAT 4597 Query 159701 TGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGC 159760 |||||||||||| || ||||| || || ||| |||||||||| ||||||| || || Sbjct 4598 TGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGC 4657 Query 159761 TCC 159763 ||| Sbjct 4658 TCC 4660 >seq152218 Length=324 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 158745 ATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTG 158804 || |||||||||| || || |||||||| ||| ||||| || ||||| || | | Sbjct 282 ATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGG 223 Query 158805 CTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATC 158864 |||||||||||||||| ||| | || ||| |||| ||| || || || ||| || | Sbjct 222 CTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGA-C 164 Query 158865 AGTCG-TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATAT 158923 | | | ||| | || || || || || | |||||||||||| || || || || || Sbjct 163 AATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTAC 104 Query 158924 CCAACATCTGA 158934 || || ||||| Sbjct 103 CCCACCTCTGA 93 >seq32149 Length=26709 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 158745 ATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTG 158804 || |||||||||| || || |||||||| ||| ||||| || ||||| || | | Sbjct 21043 ATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGG 20984 Query 158805 CTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATC 158864 |||||||||||||||| ||| | || ||| |||| ||| || || || ||| || | Sbjct 20983 CTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGA-C 20925 Query 158865 AGTCG-TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATAT 158923 | | | ||| | || || || || || | |||||||||||| || || || || || Sbjct 20924 AATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTAC 20865 Query 158924 CCAACATCTGA 158934 || || ||||| Sbjct 20864 CCCACCTCTGA 20854 >seq78999 Length=659 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 160119 GCTCTTAATCTTCGTGCTTACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCA 160178 || || || || |||||||| || || || | |||| || | | |||||||||||| Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143 Query 160179 GAATTTGAGACCTTCTACACCAAAAACATCCTATTGAACGAAGGACTACGTGCATGGTTG 160238 | |||||||| ||||||||||||| || | || |||||||| | |||| ||| || Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84 Query 160239 GCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGC 160298 | | | ||| | | ||||||||| |||| ||| | |||| || | || || Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATGGA 24 Query 160299 AACGCCCTTTAATAAA 160314 ||| | ||||||| || Sbjct 23 AACACTCTTTAATGAA 8 >seq76780 Length=5561 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 159441 GCTAGTTCCTATCTTGAGGG-TGCTAACTTTCTCACAGCAGCTGTCTCGACGCCTGCTGA 159499 || ||||| ||| | || || ||| ||||| | || || || || || || || ||| | Sbjct 411 GCAAGTTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAA 353 Query 159500 CGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCG 159559 | | | || ||| | | |||| ||||||||||| | ||||| ||||| | Sbjct 352 TAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTG 293 Query 159560 GTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTAAT 159619 ||||| || | || || | |||| |||||| || |||||||||| |||| |||| Sbjct 292 TTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAAT 233 Query 159620 TGGTTTCATGCTCCGTCAGTTTGAACT 159646 ||||||||| | ||| | |||||||| Sbjct 232 AGGTTTCATGTTACGTTAATTTGAACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546838711766200