Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 253 2e-62
seq95291 233 2e-56
seq78999 123 3e-23
seq13836 123 3e-23
seq76780 107 2e-18
>seq80997
Length=4773
Score = 253 bits (280), Expect = 2e-62
Identities = 325/442 (74%), Gaps = 6/442 (1%)
Strand=Plus/Plus
Query 150838 CTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCT 150897
||| ||| | ||| | ||| || | || ||||| || | || ||||| ||||| |
Sbjct 4335 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4394
Query 150898 GATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCC 150957
||||||||| ||| | ||| | ||||| | || || | || || |||||||| ||
Sbjct 4395 GATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454
Query 150958 CCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAA 151017
|| || || || ||||| || ||||| || ||| |||| ||||| | || || |||||
Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514
Query 151018 CATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCAT 151077
||||| |||||||| || ||||| ||||| ||||| ||| |||| || ||||| ||
Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574
Query 151078 CTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 151137
|||||||||||| ||| | ||||| ||| | |||||||| ||||||| |||| ||||
Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634
Query 151138 CTTCCACTTCCTGATTG--GTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTAC 151195
| |||||| | ||| ||| || ||| ||||||||||||||||||||||| ||
Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692
Query 151196 CGCTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAG 151254
|| ||||||||||||| ||||| ||| |||||||| | |||| |||| || || |
Sbjct 4693 CGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTAC 4751
Query 151255 TGCAGTGTTCCTCGTCTATCCT 151276
| | || ||| | ||||||||
Sbjct 4752 TACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 233 bits (258), Expect = 2e-56
Identities = 285/379 (75%), Gaps = 10/379 (3%)
Strand=Plus/Minus
Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925
|| ||||| || | || ||||| | ||| |||||||||| ||| | ||| | ||||
Sbjct 6034 AATCGTCTTTACATTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAA-- 5977
Query 150926 ATT-TGC-TTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTG 150983
||| || || || | || || |||||||| || || || || || ||||| || ||||
Sbjct 5976 ATTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTG 5917
Query 150984 AACCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTT 151043
| | ||| |||| ||||| | || || ||||| ||||| | |||||| || |||||
Sbjct 5916 AGCTTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTA 5857
Query 151044 CTTCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAAT 151103
||||| ||||| ||| |||| || ||||| |||||||||||||| ||| | ||||| |
Sbjct 5856 CTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGT 5797
Query 151104 GGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTAT--CTA 151161
|| | |||||||| ||||||| |||| |||| | |||||| | ||||| | ||
Sbjct 5796 GGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT- 5738
Query 151162 TGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTG 151221
|||| |||||||||||||||||||||| || || ||||||||||||| ||||| ||
Sbjct 5737 TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT-TG 5680
Query 151222 C-GTTGCATACTCTGCTCC 151239
| |||||||| || |||||
Sbjct 5679 CTGTTGCATATTCAGCTCC 5661
>seq78999
Length=659
Score = 123 bits (136), Expect = 3e-23
Identities = 215/310 (69%), Gaps = 2/310 (1%)
Strand=Plus/Minus
Query 153062 CTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATT 153121
|||| || || ||||| | || ||| ||||||| ||||||| | ||| | | ||
Sbjct 323 CTAATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT 264
Query 153122 TCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTC 153181
|| |||| | |||||||| || | ||| | ||| | | || |||| | || ||
Sbjct 263 -CTGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTT 205
Query 153182 TTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATC 153241
| || || || || |||||||| || ||||| ||| ||||||| | | |||||||||
Sbjct 204 TGGCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATC 145
Query 153242 CTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGT 153301
|| ||||||||| ||||| || || | ||| | || ||||||||| |||||| |||
Sbjct 144 CT-TATTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGA 86
Query 153302 TGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAG 153361
||| | | || | | |||||| ||| | | ||| || ||||||| | |||| |
Sbjct 85 TGGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATG 26
Query 153362 GCAACGCTCT 153371
| ||| ||||
Sbjct 25 GAAACACTCT 16
>seq13836
Length=10167
Score = 123 bits (136), Expect = 3e-23
Identities = 149/200 (75%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 152631 TCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTT 152690
|||| | || || || ||| ||||||| || |||||||| ||||||| |||| || ||
Sbjct 4463 TCAGTTAGGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTT 4522
Query 152691 CATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTG 152749
|||| | || || |||||||| || || ||| || | | || || || ||||| | |
Sbjct 4523 CATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCG 4581
Query 152750 CGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAAT 152809
| ||||| ||||| || |||||||||||| || || || || || || |||||||| |
Sbjct 4582 CATTCTCAGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGT 4641
Query 152810 CGAGTTGGTTTTTCGCTCCA 152829
| ||||||| || ||||||
Sbjct 4642 CTGGTTGGTTCTTTGCTCCA 4661
>seq76780
Length=5561
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 152500 GGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTTTCTACTCCA 152559
|| ||||||||||| ||| | || ||| ||||| | || || |||||||| |||||
Sbjct 417 GGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAGTTTCCACTCCC 358
Query 152560 GCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTC 152619
|| || | | | || ||| | || | || ||||||||||| || || || ||||
Sbjct 357 GCTAATAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTT 298
Query 152620 GTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCT 152679
| | ||| |||| | || || || ||| ||||||| || ||||||| |||||||
Sbjct 297 ACCTGTTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGA 238
Query 152680 CTAATCGGTTTCATGCTTCGCCAGTTTGAACT 152711
|||| ||||||||| | || | ||||||||
Sbjct 237 TTAATAGGTTTCATGTTACGTTAATTTGAACT 206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548083216820200
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