Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq222699 232 8e-55
seq205188 230 3e-54
seq46353 96.9 4e-14
seq170211 87.8 2e-11
seq36327 87.8 2e-11
seq65218 86.0 8e-11
>seq222699
Length=2956
Score = 232 bits (256), Expect = 8e-55
Identities = 227/293 (77%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
||||||||||||||||||||||||||||||||||| || || | |||| || |||||
Sbjct 369 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGGGCCTCGGCGGCTTGG 310
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
| ||||||||||| ||| |||| ||||| ||| |||||||||||| |||||| ||
Sbjct 309 ATTTCCTTCATGAAGCGGGCGGCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAAG 250
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812
|| || |||||||| |||| |||| ||||||| ||||| |||| || |||||||| |
Sbjct 249 AAGGCGAGGACGTGGGTGATGAAGTAGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCGG 190
Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872
||| | || || ||||| ||||||||||||| ||||| ||||| || ||||||
Sbjct 189 AGGTCTTGGGAAAGATCAACCTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTCTTGTAC 130
Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925
|| ||||| | ||| |||| |||| ||||| | | || |||| ||||||
Sbjct 129 ATTTCCCAAATTTGGGGGTATTGGATTGGGAACATGCAGAACCGGTCGGGGTT 77
Score = 158 bits (174), Expect = 1e-32
Identities = 186/252 (74%), Gaps = 6/252 (2%)
Strand=Plus/Minus
Query 869200 TTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCA 869259
||||||| |||| |||||||||||| | |||||||||||| |||||||| || | |||
Sbjct 628 TTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCCGCGCTTCTTTAGCCAAAATATCGAGCA 569
Query 869260 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAA 869319
||| ||||| ||||| ||||| ||||||||| ||| ||| ||| ||| |||||||||||
Sbjct 568 GAAGCTGCCGGAGAAGAAGATTCCCTCGACGCAGGCGAAGGCGACGAGGCGCTCGGCAAA 509
Query 869320 GGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGA 869379
|| |||| | | || |||||| || ||||| | |||||| || || |
Sbjct 508 GGAGTCGGTGGCATC------GATCCAGCGCAAGGCCCATTGGGCCTTCTTGGCGACACA 455
Query 869380 CGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGT 869439
|| | || || | |||||| || ||||| | |||||||| | ||| |||| |||||
Sbjct 454 GGGGATGGTATCTACGGCGCGGAACAGGTGATTCTTTTCGGTGGAGTCTTTGATGTAGGT 395
Query 869440 GTCGATCAGGAG 869451
|| | |||||
Sbjct 394 TTCCAAGAGGAG 383
Score = 87.8 bits (96), Expect = 2e-11
Identities = 207/310 (67%), Gaps = 2/310 (1%)
Strand=Plus/Minus
Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759
|| || || |||||| || || ||||| || ||||||| ||| || || | |||||||
Sbjct 954 TAGTCCCCAACGCGCTTTTCAAAGAAGTTAGTTTTGCCCTGGAGAGATATAAGCTCCATC 895
Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819
|| || || || | ||| ||| ||||||| |||| | |||| |||
Sbjct 894 CAGTCAAAGGGATTCTGAACACCGTACACCTTCCCGCATCCAAGCGCACCCAGCAACCGG 835
Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACC 868879
|| || |||||||| || || || | ||| || | ||||||| || | | |||
Sbjct 834 TCCGCAACAAACTCAATATATTGACTCATTAGCTCCCCGTTCATCCCCACCAACGCACAG 775
Query 868880 GGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTG 868939
|| |||| |||| |||||||||| |||| || || || || ||| | |||| |||
Sbjct 774 GGAAGCGCGTCGCACACAAACTCTCTCTCTATGTCAACCGCTTCGCGCACAATCT-CCTT 716
Query 868940 GGCACG-TCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 868998
| || ||| | | | |||| | ||| | | ||| | ||||| || ||||||||
Sbjct 715 CACGCGCTCGTCGGTGAGCTTCCTCCTGAGGAGAGAGTACAAGAGGCACGCGAAGTCGCA 656
Query 868999 GTGCAACCCT 869008
||| | ||||
Sbjct 655 GTGAAGCCCT 646
>seq205188
Length=846
Score = 230 bits (254), Expect = 3e-54
Identities = 214/272 (79%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
||||| ||||||||||||||||||||||||||||||||||| | |||| | || |||
Sbjct 286 GAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCGCGGGCCTCGGAGACCTGG 345
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||||||||| || |||||||| ||||| ||| |||||||||||| |||||||||
Sbjct 346 ACCTCCTTCATAAAACGGCCGGCGAGGTTTTCGAGTACGATGCCGTCGGAGGCGGCGAAG 405
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812
|| || |||||||| |||| || ||||||||| ||||| |||| | ||| ||| |
Sbjct 406 AAGGCAAGGACGTGGGTGATGAAATGGCGCTCGCCGTCGGTGAGAGTGTTCCAATGGCTG 465
Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872
|||| ||| || |||||||| || ||||||| |||||| || || || ||||||
Sbjct 466 ATGTCCTGAGAGAGATCGACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTTCTTGTAC 525
Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904
|| ||||| | ||| |||| ||||||||||
Sbjct 526 ATTTCCCAGATTTGGGGGTATTGGATAGGGAA 557
Score = 136 bits (150), Expect = 5e-26
Identities = 195/274 (71%), Gaps = 8/274 (3%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| |||||||| ||| | ||||||| |||| ||| || ||||||||||| || ||
Sbjct 6 ACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCCCGTTT 65
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| ||| || || || ||||| ||||| ||||| ||| ||||||
Sbjct 66 CTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAGGCAAA 125
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTC-GAGGCCCTCCTTGTTGATCCACTTCATCGCCC 869357
||| || |||||||| |||| ||| || | || |||||| | ||||
Sbjct 126 TGCGACGATGCGCTCGGCGAAGGAGTCGGAAG-------AGTCGATCCAGCGGAGGGCCC 178
Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417
||| |||||| || | || | || | ||||| |||||| ||||||| || || |
Sbjct 179 AGTTGGCCTTCTTGGTGACACAGGGAATGGTGTCAATGGCGTGAAAGAGACGGCTTTTCT 238
Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451
| | | ||| || | ||||| |||| |||||
Sbjct 239 CTACGGAGTCTTTTATGTAGGTTTCGAGGAGGAG 272
>seq46353
Length=13648
Score = 96.9 bits (106), Expect = 4e-14
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||||| |||||||| ||||| |||||| ||| || |||| || ||
Sbjct 5718 GCTGCGAACTACCTGAACATCAAGAGCCTGCTGGATCTTACATGCCAGACTGTAGCAGAC 5777
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||| ||| | || ||||| || ||||||||||||||||| |||
Sbjct 5778 ATGATCAAGGGGAAGACTCCAGAGGAAATTCGCAAGACCTTTAACATTAAG 5828
>seq170211
Length=424
Score = 87.8 bits (96), Expect = 2e-11
Identities = 153/216 (71%), Gaps = 9/216 (4%)
Strand=Plus/Minus
Query 1470039 GTGGTCGTCCCATATCATGACGC-GATCGTCGCGAAAGCACGGGCTGGCG-CCGCCGCCC 1470096
|||||||||||| |||||||| | | | | |||| ||||||| | ||||||||
Sbjct 236 GTGGTCGTCCCAGATCATGACCTTGTTGGGAGGGAAATG--GGGCTGGGGTCCGCCGCCG 179
Query 1470097 ACCAGCGCGACGATGTTGGACCGGAAGAGCATGGTGGCGAGGCCCA---CGCCGCCGCCC 1470153
|| || |||| ||||||| | ||||||||||| | || |||| | |||||||| |
Sbjct 178 ACGAGGGCGATGATGTTGCATCGGAAGAGCATCTCGACGTGGCCGATTCCGCCGCCGTCA 119
Query 1470154 AGGTCGCGCTCGTAGCGCAGCGC-AAACGGGTCGGCATTCCACACGCGGAAGCCCTTGCG 1470212
| ||||| | | || ||| || |||| | ||| | | |||||| || |||
Sbjct 118 AACTCGCGGCGGAATTGC-TCGCTGAAGGGGTTGCAATTGTAGATGCGGAAACCGTTGTC 60
Query 1470213 TGTGGCCGCCGTGAGGCACGACTGGTCCTGGTTGAA 1470248
||||| || | || ||| | |||||||||||||||
Sbjct 59 AGTGGCGGCGGAGAAGCAAGCCTGGTCCTGGTTGAA 24
>seq36327
Length=26407
Score = 87.8 bits (96), Expect = 2e-11
Identities = 153/216 (71%), Gaps = 9/216 (4%)
Strand=Plus/Minus
Query 1470039 GTGGTCGTCCCATATCATGACGC-GATCGTCGCGAAAGCACGGGCTGGCG-CCGCCGCCC 1470096
|||||||||||| |||||||| | | | | |||| ||||||| | ||||||||
Sbjct 15290 GTGGTCGTCCCAGATCATGACCTTGTTGGGAGGGAAATG--GGGCTGGGGTCCGCCGCCG 15233
Query 1470097 ACCAGCGCGACGATGTTGGACCGGAAGAGCATGGTGGCGAGGCCCA---CGCCGCCGCCC 1470153
|| || |||| ||||||| | ||||||||||| | || |||| | |||||||| |
Sbjct 15232 ACGAGGGCGATGATGTTGCATCGGAAGAGCATCTCGACGTGGCCGATTCCGCCGCCGTCA 15173
Query 1470154 AGGTCGCGCTCGTAGCGCAGCGC-AAACGGGTCGGCATTCCACACGCGGAAGCCCTTGCG 1470212
| ||||| | | || ||| || |||| | ||| | | |||||| || |||
Sbjct 15172 AACTCGCGGCGGAATTGC-TCGCTGAAGGGGTTGCAATTGTAGATGCGGAAACCGTTGTC 15114
Query 1470213 TGTGGCCGCCGTGAGGCACGACTGGTCCTGGTTGAA 1470248
||||| || | || ||| | |||||||||||||||
Sbjct 15113 AGTGGCGGCGGAGAAGCAAGCCTGGTCCTGGTTGAA 15078
>seq65218
Length=5182
Score = 86.0 bits (94), Expect = 8e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| |||||| ||||||||| |||||||||||||||||| |||| || || |||
Sbjct 126 GCCTTCTGGTACTCCCCCACGCGCTTCTCGAAAAAGTTGGTCTTCCCCTGCAGGGAAATC 67
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCG 868805
| ||||||||| ||||||||| || ||||| ||| |||| || ||||
Sbjct 66 AGCTCCATCCAATCGAACGGGTTCTGCACATTGTACACCTTCCCGCACCCAAGCG 12
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6088753838744095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |