Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq78818 87.8 2e-12 >seq78818 Length=11534 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 194236 CGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGG 194294 |||||||| | || || || |||||| || || || | |||| | |||||| ||| Sbjct 261 CGTATACCACATATTGGTGACAAATTTAGTAGTAGACATAG-TCAACAGGGAACTATTGG 203 Query 194295 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 194354 ||||| |||| |||||||||| ||||| | || | | ||| ||| || | |||||| Sbjct 202 TATGACTTATACACAAGAAGACATGCCCTGGACTAGATAAGGCATGACCCCTGGTATTAT 143 Query 194355 TATCAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 |||||||| | || ||||| || |||||||| ||| Sbjct 142 TATCAATCTAGATGCCATTCCTTCTAGAATGACAATT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 630718352405800