Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_022052.1 Length=76050 Score E Sequences producing significant alignments: (Bits) Value seq21506 87.8 9e-13 >seq21506 Length=5703 Score = 87.8 bits (96), Expect = 9e-13 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 55441 GGGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCTGGCGTGGCGGTCGCTCA 55500 ||||||||||||||| || || || ||| | | | | | || || |||| || | Sbjct 5336 GGGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCGAA 5277 Query 55501 GTTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAA-GCAGACGAACGAGTGGGAGGACG 55559 ||| | | || || || || ||||| ||| || || | ||||||||||| |||||| Sbjct 5276 CTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCG-CGAACGAGTGGAAGGACG 5218 Query 55560 GCGAAACCGTGTTCCTCCGTACGTCGGTGTGGCGTGAGCTTGCAGAGGGCGCGGC 55614 ||||| | |||||||||| | ||||||||||||||| | || ||| || ||| Sbjct 5217 GCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGC 5163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242571064148985