Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 122 7e-23
>seq39107
Length=55737
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || || ||||| || ||||| || | ||| |||| |
Sbjct 43770 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 43829
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | | || ||| ||||||| ||||| || || | ||| |||||
Sbjct 43830 AGATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCA 43889
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| ||||| | ||| || |||||||| || || | | ||| | ||||| |||||
Sbjct 43890 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTACAA 43949
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || ||||| ||||| |||| ||||| | || || ||||
Sbjct 43950 CATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 43999
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || || ||||| || ||||| || | ||| |||| |
Sbjct 48780 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 48839
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | | || ||| ||||||| ||||| || || | ||| |||||
Sbjct 48840 AGATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCA 48899
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| ||||| | ||| || |||||||| || || | | || | ||||| |||||
Sbjct 48900 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGGACCCTTGCGGATTACAA 48959
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || ||||| ||||| |||| ||||| | || || ||||
Sbjct 48960 CATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 49009
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || || ||||| || ||||| || | ||| |||| |
Sbjct 50043 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 50102
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | | || ||| ||||||| ||||| || || | ||| |||||
Sbjct 50103 AGATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCA 50162
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| ||||| | ||| || |||||||| || || | | || | ||||| |||||
Sbjct 50163 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGGACCCTTGCGGATTACAA 50222
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || ||||| ||||| |||| ||||| | || || ||||
Sbjct 50223 CATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 50272
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||| || |||||||| || |||||||| ||| | || |||| |
Sbjct 48325 ATGCAGATTTTTGTGAAGACTTTAACTGGAAAAACCATAACCTTGGAGGTGGAGAGTTCA 48384
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||| || ||||| ||| | || |||||||
Sbjct 48385 GATACCATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCTCCGGATCAG 48444
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| ||||||| ||| |||||||| |||||||| | | || | || || |||||
Sbjct 48445 CAGAGGCTTATTTTTGCTGGTAAACAACTGGAGGATGGAAGGACCCTTGCCGATTACAAT 48504
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||| |||||||| ||| | ||| |||||
Sbjct 48505 ATTCAGAAGGAGTCCACGCTCCACTTGGTG 48534
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||| || |||||||| || |||||||| ||| | || |||| |
Sbjct 49588 ATGCAGATTTTTGTGAAGACTTTAACTGGAAAAACCATAACCTTGGAGGTGGAGAGTTCA 49647
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||| || ||||| ||| | || |||||||
Sbjct 49648 GATACCATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCTCCGGATCAG 49707
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| ||||||| ||| |||||||| |||||||| | | || | || || |||||
Sbjct 49708 CAGAGGCTTATTTTTGCTGGTAAACAACTGGAGGATGGAAGGACCCTTGCCGATTACAAT 49767
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||| |||||||| ||| | ||| |||||
Sbjct 49768 ATTCAGAAGGAGTCCACGCTCCACTTGGTG 49797
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||| || |||||||| || |||||||| ||| | || |||| |
Sbjct 43271 ATGCAGATTTTTGTGAAGACTTTAACTGGAAAAACCATAACCTTGGAGGTGGAGAGTTCA 43330
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||| || ||||| ||| | || |||||||
Sbjct 43331 GATACCATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCTCCGGATCAG 43390
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| ||||||| ||| |||||||| |||||||| | | || | || || |||||
Sbjct 43391 CAGAGGCTTATTTTTGCTGGTAAACAACTGGAGGATGGAAGGACCCTTGCCGATTACAAT 43450
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||| |||||||| ||| ||| |||||
Sbjct 43451 ATTCAGAAGGAGTCGACGCGCCACTTGGTG 43480
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || || |||||||| || || ||||| || ||| | || ||| |
Sbjct 26097 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 26156
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||| || |||||||| | || |||||||
Sbjct 26157 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 26216
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| || |||||||| || ||||||| | ||| | || || ||||||
Sbjct 26217 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 26276
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|||||||||||||| ||| | ||| |||||
Sbjct 26277 ATTCAAAAGGAGTCCACGCTCCACTTGGTG 26306
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || || |||||||| || || ||||| || ||| | || ||| |
Sbjct 29420 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 29479
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||| || |||||||| | || |||||||
Sbjct 29480 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 29539
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| || |||||||| || ||||||| | ||| | || || ||||||
Sbjct 29540 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 29599
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|||||||||||||| ||| | ||| |||||
Sbjct 29600 ATTCAAAAGGAGTCCACGCTCCACTTGGTG 29629
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || || |||||||| || || ||||| || ||| | || ||| |
Sbjct 46351 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 46410
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||| || |||||||| | || |||||||
Sbjct 46411 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 46470
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| || |||||||| || ||||||| | ||| | || || ||||||
Sbjct 46471 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 46530
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|||||||||||||| ||| | ||| |||||
Sbjct 46531 ATTCAAAAGGAGTCCACGCTCCACTTGGTG 46560
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613
|||||| || ||||| || ||| | ||||| || ||||||||| | || |||| |||
Sbjct 26780 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 26839
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
||||| | | | || ||| ||||||| || || || ||| | || ||||
Sbjct 26840 T-GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATC 26898
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
||||||| ||||||| ||| || ||||| |||| || | || |||| |||||||
Sbjct 26899 AGCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 26958
Query 107734 ACATTCAAAAGGAGTCTAC 107752
||||||| ||||| || ||
Sbjct 26959 ACATTCAGAAGGAATCCAC 26977
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613
|||||| || ||||| || ||| | ||||| || ||||||||| | || |||| |||
Sbjct 30103 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 30162
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
||||| | | | || ||| ||||||| || || || ||| | || ||||
Sbjct 30163 T-GATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATC 30221
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
||||||| ||||||| ||| || ||||| |||| || | || |||| |||||||
Sbjct 30222 AGCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 30281
Query 107734 ACATTCAAAAGGAGTCTAC 107752
||||||| ||||| || ||
Sbjct 30282 ACATTCAGAAGGAATCCAC 30300
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613
|||||| || ||||| || ||| | ||||| || ||||||||| | || |||| |||
Sbjct 41617 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 41676
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
||||| | | | || ||| ||||||| || || || ||| | || ||||
Sbjct 41677 T-GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATC 41735
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
||||||| ||||||| ||| || ||||| |||| || | || |||| |||||||
Sbjct 41736 AGCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACA 41795
Query 107734 ACATTCAAAAGGAGTCTAC 107752
||||||| ||||| || ||
Sbjct 41796 ACATTCAGAAGGAATCCAC 41814
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||||||||| ||| | || || ||||| ||||| | || || |
Sbjct 26553 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 26612
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | ||||| |||||| || ||||| || | || || |||
Sbjct 26613 GATACCATTGACAATGTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACCAG 26672
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| || ||||| | ||| || || |||||||| || | ||| | || || || |||
Sbjct 26673 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAAC 26732
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| || ||||| ||||| ||||| |||||||||| | || || ||||
Sbjct 26733 ATCCAGAAGGAATCTACTCTGCACCTGGTGTTGAGGCTTCGTGGTGGAA 26781
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||||||||| ||| | || || ||||| ||||| | || || |
Sbjct 41390 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 41449
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | ||||| |||||| || ||||| || | || || |||
Sbjct 41450 GATACCATTGACAATGTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACCAG 41509
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| || ||||| | ||| || || |||||||| || | ||| | || || || |||
Sbjct 41510 CAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAAC 41569
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| || ||||| ||||| ||||| |||||||||| | || || ||||
Sbjct 41570 ATCCAGAAGGAATCTACTCTGCACCTGGTGTTGAGGCTTCGTGGTGGAA 41618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397787696190115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |