Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 89.7 8e-13
seq158136 87.8 3e-12
>seq39107
Length=55737
Score = 89.7 bits (98), Expect = 8e-13
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || | |||||||| || ||||| | || || || |
Sbjct 30105 TGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCTG 30164
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| ||| || || ||| || || ||||||||||| ||||| |
Sbjct 30165 ATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATCAGC 30224
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || |||||||| || |||||||| || ||| | | || || |||| || || |
Sbjct 30225 AGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 30284
Query 146212 TACAAAAAGAATCGACTATCCA 146233
| || || ||||| || ||||
Sbjct 30285 TTCAGAAGGAATCCACCCTCCA 30306
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || | |||||||| || ||||| | || || || |
Sbjct 26782 TGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCTG 26841
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| ||| || || || || || ||||||||||| ||||| |
Sbjct 26842 ATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAGC 26901
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || |||||||| || |||||||| || ||| | | || || |||| || || |
Sbjct 26902 AGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 26961
Query 146212 TACAAAAAGAATCGACTATCCA 146233
| || || ||||| || ||||
Sbjct 26962 TTCAGAAGGAATCCACCCTCCA 26983
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || | |||||||| || ||||| | || || || |
Sbjct 41619 TGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCTG 41678
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| ||| || || || || || ||||||||||| ||||| |
Sbjct 41679 ATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAGC 41738
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || |||||||| || |||||||| || ||| | | || || |||| || || |
Sbjct 41739 AGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 41798
Query 146212 TACAAAAAGAATCGACTATCCA 146233
| || || ||||| || ||||
Sbjct 41799 TTCAGAAGGAATCCACCCTCCA 41820
Score = 84.2 bits (92), Expect = 3e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| || || || || || || || |||| |||||| |
Sbjct 40935 TGCAGATCTTTGTGAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTAGAATCGTCTG 40994
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| || ||| || || ||||| || || || || |||||||
Sbjct 40995 ACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAAC 41054
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|||| | |||||||| ||||||||| | || ||| ||||| | | ||||| ||||
Sbjct 41055 AAAGGTTAATTTTTGCTGGTAAACAACTCGAGGATGGGAGAACCCTTGCCGATTACAATA 41114
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || || || || |||| || || | || || || || ||
Sbjct 41115 TTCAGAAGGAGTCCACGCTCCACTTGGTGCTTCGTTTGAGGGGTGG 41160
>seq158136
Length=352
Score = 87.8 bits (96), Expect = 3e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || ||||| || ||||| ||||| ||| |||| || ||| |
Sbjct 22 TGCAAATCTTTGTGAAGACATTGACGGGAAAGACAATCACTCTTGAAGTGGAAAGCTCTG 81
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| || ||| || || ||||| || || ||||| || || |
Sbjct 82 ACACCATTGACAATGTCAAGGCTAAGATTCAGGACAAAGAGGGTATCCCACCAGACCAGC 141
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|||| ||||||||||| || ||||| | || ||| |||| | | ||||| || |
Sbjct 142 AAAGGCTCATTTTTGCTGGAAAACAGCTTGAGGATGGCCGAACCCTTGCCGATTACAACA 201
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| || ||||| || || | ||||| ||
Sbjct 202 TTCAGAAAGAGTCTACCCTGCATTTGGT 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783964790132200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |