Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq80997 212 7e-50 seq95291 190 2e-43 seq55772 134 1e-26 seq13836 127 2e-24 seq152218 109 6e-19 seq32149 109 6e-19 seq78999 89.7 6e-13 seq76780 82.4 8e-11 >seq80997 Length=4773 Score = 212 bits (234), Expect = 7e-50 Identities = 312/439 (71%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 ||||| | ||| |||| |||| | || ||| | || |||| ||||| ||||| | Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169 |||||||| || || | | |||||| |||| || ||| | || || | || || || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229 ||| || ||||| || |||||||| || || ||| |||| ||||| | ||||| ||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289 ||||| |||||||| || ||||| |||| || || ||| | || || || || || Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349 |||||||||||| || ||||||||||| | |||||||| ||||||| |||| | || Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409 | |||||| | | || | | ||| ||||| ||||||||||||||| || || Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 4694 Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469 | | |||||||| || ||||| |||||| || | || | || | || || | | | Sbjct 4695 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTAC 4754 Query 157470 AGTATTCCTCGTCTATCCT 157488 || ||| | |||||||| Sbjct 4755 TGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 190 bits (210), Expect = 2e-43 Identities = 285/402 (71%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 ||||| | ||| |||| || | | || ||| | || |||| ||||| | ||| | Sbjct 6061 TTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTTGATGTTTTG 6002 Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169 |||||||| || || | | |||| | |||| || ||| | || || | || || || Sbjct 6001 ATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 5943 Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229 ||| || ||||| || |||||||| || | ||| |||| ||||| | ||||| ||||| Sbjct 5942 TCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTATGGAAACAA 5883 Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289 ||||| | |||||| || ||||| |||| || || ||| | || || || || || Sbjct 5882 TATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 5823 Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349 |||||||||||| || ||||||||||| | |||||||| ||||||| |||| | || Sbjct 5822 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 5763 Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409 | |||||| | | || | | ||| ||||| ||||||||||||||| || || Sbjct 5762 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 5703 Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACC 157451 | | |||||||| || ||||| |||||| || || || || Sbjct 5702 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661 >seq55772 Length=6464 Score = 134 bits (148), Expect = 1e-26 Identities = 168/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 158222 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGT 158281 ||||||||||| |||||||| || || |||||||| || ||||| || || || || Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309 Query 158282 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158341 || |||||| | ||||| || || ||||| ||||| | || |||||| |||| || Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249 Query 158342 TTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158401 ||||| || || ||||| | || ||||||| | ||||| ||||| | |||||||| Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189 Query 158402 TCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAACCTTTACTGA 158446 | |||||||| ||| ||| | |||| ||||||| || |||||| Sbjct 1188 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 1144 Score = 134 bits (148), Expect = 1e-26 Identities = 168/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 158222 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGT 158281 ||||||||||| |||||||| || || |||||||| || ||||| || || || || Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777 Query 158282 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158341 || |||||| | ||||| || || ||||||||||| | | |||||| |||| || Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717 Query 158342 TTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158401 ||||| || || ||||| | || ||||||| | ||||| ||||| | |||||||| Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657 Query 158402 TCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAACCTTTACTGA 158446 | |||||||| ||| ||| | |||| ||||||| || |||||| Sbjct 3656 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 3612 >seq13836 Length=10167 Score = 127 bits (140), Expect = 2e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 159054 GGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTT 159113 || || || |||| |||||| || ||||||||||| || | |||| || |||||| | Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529 Query 159114 CGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTC 159172 || || |||||||| || || ||| || | | || || || ||||| | || ||||| Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTC 4588 Query 159173 TGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTG 159232 ||||| |||||||||||||| || |||||||| || ||||| |||||||| |||| Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648 Query 159233 GTTTTTCGCTCC 159244 ||| || ||||| Sbjct 4649 GTTCTTTGCTCC 4660 >seq152218 Length=324 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 158179 AACTCCTGAGGGAGAAACAGTTATCCAGTGTGAAGAGGATCAATACATTCTAGACGCAGC 158238 ||| || |||||||| | || || || ||| || |||||||||| || || || Sbjct 320 AACCCCAGAGGGAGAGAAAGAGATAACATGCCCAGATAATGAATACATTCTTGATGCTGC 261 Query 158239 AGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGC 158298 |||||| ||| ||||| || |||||| || | ||||||||||||||||| ||| | Sbjct 260 AGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGTGCTTGCTCTTCCTGTAC 201 Query 158299 AGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG-TTCCTAGACGATGATC 158357 || ||| |||| ||| || || || ||| || || | | ||||| || || || | Sbjct 200 TGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGA-CAATAGCTTCCTTGATGACGACC 142 Query 158358 AAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACATCTGA 158406 |||||| |||||||||||| || || || || || || || ||||| Sbjct 141 AAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCACCTCTGA 93 >seq32149 Length=26709 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 158179 AACTCCTGAGGGAGAAACAGTTATCCAGTGTGAAGAGGATCAATACATTCTAGACGCAGC 158238 ||| || |||||||| | || || || ||| || |||||||||| || || || Sbjct 21081 AACCCCAGAGGGAGAGAAAGAGATAACATGCCCAGATAATGAATACATTCTTGATGCTGC 21022 Query 158239 AGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGC 158298 |||||| ||| ||||| || |||||| || | ||||||||||||||||| ||| | Sbjct 21021 AGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGTGCTTGCTCTTCCTGTAC 20962 Query 158299 AGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG-TTCCTAGACGATGATC 158357 || ||| |||| ||| || || || ||| || || | | ||||| || || || | Sbjct 20961 TGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGA-CAATAGCTTCCTTGATGACGACC 20903 Query 158358 AAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACATCTGA 158406 |||||| |||||||||||| || || || || || || || ||||| Sbjct 20902 AAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCACCTCTGA 20854 >seq78999 Length=659 Score = 89.7 bits (98), Expect = 6e-13 Identities = 165/238 (69%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 159537 TTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGA-CATCCAGTATTGGCATTATTGG 159595 |||| |||||| ||||| || || | ||| || ||| ||| | | |||| | || | Sbjct 265 TTCTGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATT-ACTTTTGGGGTAGTTAG 207 Query 159596 TCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGA 159655 | | || || || || |||||||| || || || | |||| || | | ||||||||| Sbjct 206 TTTGGCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGA 147 Query 159656 TCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTG 159715 ||| | ||||| || ||||||||||| | ||| | | || ||||| | |||| || Sbjct 146 TCCTTA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTG 88 Query 159716 GTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCA 159773 | ||| | | ||| | | ||||||||| | || ||| | |||| ||||||||| Sbjct 87 GATGGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCA 30 >seq76780 Length=5561 Score = 82.4 bits (90), Expect = 8e-11 Identities = 133/190 (70%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 158938 AGGGTGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTC 158997 ||| ||||| ||| | || || |||||||| ||||| ||| || | | | || ||| Sbjct 394 AGGCTGCAA-CTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTT 336 Query 158998 TTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGG 159057 | || | || ||||||||||| || || || |||| | | ||| || | || | Sbjct 335 TGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTGTTGGTGTCAGTTAGGCG 276 Query 159058 GACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCC 159117 | || |||| |||||| || |||||||||| || | |||| ||||||||| | || Sbjct 275 GTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTT 216 Query 159118 AGTTTGAACT 159127 | |||||||| Sbjct 215 AATTTGAACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543746595362800