Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq80997 196 6e-45 seq95291 167 3e-36 seq55772 134 2e-26 seq152218 123 3e-23 seq32149 123 3e-23 seq13836 120 4e-22 seq78999 93.3 5e-14 seq76780 91.5 2e-13 >seq80997 Length=4773 Score = 196 bits (216), Expect = 6e-45 Identities = 314/442 (71%), Gaps = 8/442 (2%) Strand=Plus/Plus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 |||||||| ||| | ||| | |||||| |||| || || |||| || ||||||| || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || || || || || ||||| || || |||| || || | ||||| ||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 ||||| |||||||| || | || |||| || || ||| | || || ||||| || Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 ||||||||| || || ||||||||||| | || ||||| ||||||| |||| | || Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 177857 CTTTCACTTCCTTATCG--GCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATAC 177914 | |||||| | | | | | || ||| || ||||| ||||||||||||||| | Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692 Query 177915 CGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCC 177974 ||||| |||||||| || ||||| ||||||||| | || | ||||| ||| || | Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACT 4752 Query 177975 GCAGTCTTTCTAG-TCTATCCT 177995 | || ||||| | |||||||| Sbjct 4753 ACTGT-TTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 167 bits (184), Expect = 3e-36 Identities = 258/362 (71%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 177600 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGT 177658 || ||||| | || |||||||||| ||| | ||| | |||| | |||| || || | Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961 Query 177659 CGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 177718 ||| || ||||||| || || || || || || || || ||||| | || |||| || Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901 Query 177719 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGG 177778 || | ||||| ||||| ||||| | |||||| || | || |||| || || || Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841 Query 177779 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 177838 | | || || ||||| ||||||||||| || || ||||||||||| | || ||||| || Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781 Query 177839 TCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCG--GCATCTATGCATATATGGGACGT 177896 ||||| |||| | || | |||||| | | | | | || ||| || ||||| ||| Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGT 5723 Query 177897 GAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCA 177956 |||||||||||| | ||||| |||||||| || ||||| ||||||||| || || Sbjct 5722 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 5663 Query 177957 CC 177958 || Sbjct 5662 CC 5661 >seq55772 Length=6464 Score = 134 bits (148), Expect = 2e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 |||||| ||||| || ||||| || || || || || |||| ||||| ||||| || Sbjct 1377 GATGATACCTACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGC 1318 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 || || || ||||| |||||||||||||| || | ||| || | || ||||||||| Sbjct 1317 CGCGCCGGAGCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCT 1258 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 || || ||||||||||| |||||| | || ||||||| | | || || || | Sbjct 1257 GATGGCTCATTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCC 1198 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA 138762 || || || | |||||| ||||||||||| | || || | ||||| |||||| Sbjct 1197 TATCCAACTGCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 1144 Score = 125 bits (138), Expect = 9e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 |||||| ||||| || ||||| || || || || || |||| ||||| ||||| || Sbjct 3845 GATGATACCTACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGC 3786 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 || || || ||||| |||||||||||||| || | || || | | ||||||||| Sbjct 3785 CGCGCCGGAGCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCT 3726 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 || || ||||||||||| |||||| | || ||||||| | | || || || | Sbjct 3725 GATGGCTCATTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCC 3666 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA 138762 || || || | |||||| ||||||||||| | || || | ||||| |||||| Sbjct 3665 TATCCAACTGCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 3612 >seq152218 Length=324 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 ||| || | ||||| ||||||||||| || || ||| |||||||||||||||| || Sbjct 286 GATAATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGC 227 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 | |||||||| || ||| ||||| |||| ||| | || || || || || ||||| Sbjct 226 AGGGCTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCA 167 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 ||| | ||||||||||| |||||||| | ||||||| | | || ||||| || Sbjct 166 GACAATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCT 107 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTA 138756 |||||||| || || | | ||| | || | || ||||| || ||| Sbjct 106 TACCCCACCTCTGACCTTGTTATTCAGACCCACAAGGAGGATGAGCTA 59 >seq32149 Length=26709 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 ||| || | ||||| ||||||||||| || || ||| |||||||||||||||| || Sbjct 21047 GATAATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGC 20988 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 | |||||||| || ||| ||||| |||| ||| | || || || || || ||||| Sbjct 20987 AGGGCTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCA 20928 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 ||| | ||||||||||| |||||||| | ||||||| | | || ||||| || Sbjct 20927 GACAATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCT 20868 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTA 138756 |||||||| || || | | ||| | || | || ||||| || ||| Sbjct 20867 TACCCCACCTCTGACCTTGTTATTCAGACCCACAAGGAGGATGAGCTA 20820 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 ||| || | ||| | ||||||||||| || |||| ||| ||||| ||||||||||| || Sbjct 14117 GATAATGAATACGTTCTTGATGCTGCAGAAGAAGTAGGCATTGACCTTCCCTACTCATGC 14058 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 | |||||| | || ||| |||| || | ||| | || || || || ||||| Sbjct 14057 AGGGCTGGTTCTTGCTCTTCCTGCGCCGCCAAAATTGTCTCCGGCCAAGTCGACCAGTCA 13998 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 ||| ||||||||||| ||||| |||| ||||| ||| | | || ||||| || Sbjct 13997 GACGGTAACTTCCTTGATGACGACCAGATTGATGCAGGCTTTGTTCTCACCTGCGTTGCT 13938 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTA 138756 | ||| || |||||| | | || | || | || ||||| || ||| Sbjct 13937 TTCCCAACCTCCGATCTTGTCATCCAGACCCACAAGGAGGATGAGCTA 13890 >seq13836 Length=10167 Score = 120 bits (132), Expect = 4e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 179218 GGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTT 179277 || || || |||| ||| || |||||||||||||| |||| |||| || |||||| | Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529 Query 179278 CGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTAC 179336 ||||| |||||||| || || ||| || | | || ||||| ||||| | || || | Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTC 4588 Query 179337 TGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTG 179396 ||||| ||||| || || ||| |||||| || || || ||||| || || || |||| Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648 Query 179397 GTTCTTTGCGCCA 179409 ||||||||| ||| Sbjct 4649 GTTCTTTGCTCCA 4661 >seq78999 Length=659 Score = 93.3 bits (102), Expect = 5e-14 Identities = 198/293 (68%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 179644 AACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTC 179703 || || |||||||| | ||||| |||| | || |||||| ||||||| | ||| Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACG-TTC 263 Query 179704 TTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTA 179763 | || | | ||||| || || | ||| | || || | || |||| | || | | Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203 Query 179764 GCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCT 179823 || || || || ||||||||||| ||||| | |||| || | | ||||||||||||| Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143 Query 179824 GAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTG 179883 | || ||||| ||||| || || | ||| | | || ||||| | |||| ||| || Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84 Query 179884 GCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACC 179936 | | | ||| | | ||||||||| | || ||| | |||| || ||||| Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31 >seq76780 Length=5561 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 179086 GCTAGTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGA 179144 || ||||| ||| | ||||| ||| ||||| | || || || || || || || ||| | Sbjct 411 GCAAGTTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAA 353 Query 179145 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCG 179204 | | | | || ||| | | |||| ||||||||||| | ||||| ||||| | Sbjct 352 TAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTG 293 Query 179205 GTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAAT 179264 ||||| || | || || || |||| ||| || ||| |||||||||| |||| |||| Sbjct 292 TTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAAT 233 Query 179265 TGGATTCATGCTTCGTCAGTTTGAACT 179291 || |||||| | ||| | |||||||| Sbjct 232 AGGTTTCATGTTACGTTAATTTGAACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603971066860600