Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_023689.1
Length=76260
Score E
Sequences producing significant alignments: (Bits) Value
seq78941 201 6e-47
>seq78941
Length=653
Score = 201 bits (222), Expect = 6e-47
Identities = 231/311 (74%), Gaps = 0/311 (0%)
Strand=Plus/Plus
Query 66289 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66348
|| ||||| | ||||| || ||| |||||| || | ||| || | ||||||||| |||
Sbjct 333 CTGCACGCCATCGCCAACGCCCAGCGGGCCGGCGGTATCGCGGCATTCATCGACGCGGAG 392
Query 66349 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66408
|| | || ||||| || |||||| | |||||| || ||| ||||| ||| | ||
Sbjct 393 CATGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACGCCCTTCTCGTC 452
Query 66409 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66468
||||| ||||| || |||||||| || ||||||| ||| | ||||| || ||
Sbjct 453 TCGCAGCCCGACACGGGTGAGCAGGCTCTCGAGATCGCCGACATGCTCGTGCGCTCCGGT 512
Query 66469 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66528
| | | || ||||||| ||||| |||||||||||||||||||| || ||| ||||
Sbjct 513 GCCATCGACCTCATCGTCGTCGACTCGGTGGCGGCCCTGGTGCCGCGTGCGGAGATCGAG 572
Query 66529 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66588
||||| || || ||| ||||| || || || || ||||||||||||||||| ||||
Sbjct 573 GGCGAGATGGGAGACTCCCACGTGGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGG 632
Query 66589 AAGCTCACCGG 66599
|||||||||||
Sbjct 633 AAGCTCACCGG 643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 243241229302335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |