Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_023729.1
Length=43036
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 495 1e-135
>seq24349
Length=3626
Score = 495 bits (548), Expect = 1e-135
Identities = 591/795 (74%), Gaps = 13/795 (2%)
Strand=Plus/Minus
Query 36064 GTGATGCTCGGGCAAGGCATGAACCTGCAGCAGGCCCACACCTGTGTGTACATCGGCATC 36123
||||||||||| || |||||||||||||||||||| ||||| || | | ||||| ||
Sbjct 2299 GTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGTC 2240
Query 36124 ACGCACAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACC 36183
|| |||| |||||||| |||||| | ||||||| || ||||| ||||| || |
Sbjct 2239 ACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAG-CA 2181
Query 36184 CATC-CCTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCAT 36242
| | ||||| | | || ||||| || ||||||||||| || | | || | ||
Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124
Query 36243 CCGC---GAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATTCA 36299
|| | | ||| |||| | | ||| || | || || |||| | | | || |
Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064
Query 36300 TGAGTACGGACTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGATGCGA 36359
|||| |||||| |||||| || || || | || || ||| |||| || |||
Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004
Query 36360 ACGCATCGAAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAAC 36419
||| ||||| ||||||| || ||| | |||| |||||||||||| ||| ||
Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944
Query 36420 C---GAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAA 36476
| || ||||| || || || || ||||| ||||| || |||||||| ||
Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884
Query 36477 CCACTACGAGTACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGCATTT 36536
||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||| ||
Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824
Query 36537 CTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCG-CCGGGCCGTA 36595
|||| |||||||||||||||||| ||| |||| ||||| | || ||| || || || |
Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACGGA 1765
Query 36596 TCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGC 36655
|||| ||||||||||| ||||| || ||| |||||||||||||||||| |||||| | |
Sbjct 1764 TCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCC 1705
Query 36656 CCACCGTGTCCCCGTTTCACGCCGAGGCGATCTTCCACGGCCGCAAACACGGCTTCGACT 36715
||||||| || ||||| |||||||| ||| || ||||||| ||| || ||||||||||
Sbjct 1704 CCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACT 1645
Query 36716 ACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGC 36775
|| | ||||||||||||||| ||||| || ||||| || ||||||||||| ||||| |
Sbjct 1644 ACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCC 1585
Query 36776 TGGGCTGGTCCGAGCAGTGCAAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACA 36835
| |||| | ||| | |||| |||| ||| ||||||||||||||||| || || ||||
Sbjct 1584 TCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACA 1525
Query 36836 TTCTGCTGTTCCACA 36850
| ||||| |||||||
Sbjct 1524 TCCTGCTCTTCCACA 1510
Score = 167 bits (184), Expect = 6e-37
Identities = 216/295 (73%), Gaps = 10/295 (3%)
Strand=Plus/Minus
Query 35243 TGCTAGGCATCGAAACCCGGTTCGTTCGCCGCACAGAAGAAGTCGGCGGCGAC------G 35296
|||| || | ||| ||| ||| | |||||||| || || ||| | | || |
Sbjct 3252 TGCTCGGAACCGAGGTCCGCTTCATCCGCCGCACCGATGACATCGACCCCAACTGGTCCG 3193
Query 35297 GAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG-TT 35354
| ||||| |||| ||||| ||||| || |||||||| | | ||| | || | ||
Sbjct 3192 GCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGCTT 3135
Query 35355 CACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACCA 35414
| || ||| ||||||||||| |||||||||||| ||||| || |||||||||||
Sbjct 3134 CGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTACCA 3075
Query 35415 GTCGTTCCTCGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTC 35474
| |||||||| |||||||||| | | || ||||| | ||| |||||||| || || ||
Sbjct 3074 GGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCGTC 3015
Query 35475 GCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGAC 35529
|| |||||| |||||||||||||||||||||| || | ||||| | ||||||
Sbjct 3014 ACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137227543836660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |