Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq109624 84.2 1e-11 >seq109624 Length=217 Score = 84.2 bits (92), Expect = 1e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 94998 CATTGAGTTGATGAAGCTGGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGG 95057 ||| ||||| | |||||||||||| || || || |||| ||| |||||||| || ||||| Sbjct 21 CATCGAGTTCACGAAGCTGGACTTACCGGACCCCGTCGAGCCCGCCACCAGGAGGTGCGG 80 Query 95058 CATCTTGGCCAGGTTCAGGGAGACGTCCTTACCCTCGACGTCCTTGCCCAC 95108 |||||| || ||||| | |||| || || | ||||||||||| || Sbjct 81 CATCTTCGCGAGGTTGGCGACGACGAAGTTGCCGCCCACGTCCTTGCCGAC 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339192922948880