Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_023746.1
Length=57387
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 489 6e-134
seq73813 86.0 2e-12
>seq24349
Length=3626
Score = 489 bits (542), Expect = 6e-134
Identities = 590/795 (74%), Gaps = 13/795 (2%)
Strand=Plus/Minus
Query 43151 GTGATGCTCGGGCAGGGCATGAACCTGCAGCAGGCCCACACCTGTGTGTACATGGGCATC 43210
||||||||||| ||||||||||||||||||||||| ||||| || | | | ||| ||
Sbjct 2299 GTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGTC 2240
Query 43211 ACGCACAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACC 43270
|| |||| |||||||| |||||| | ||||||| || ||||| ||||| || |
Sbjct 2239 ACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAG-CA 2181
Query 43271 CATC-CCTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGTGCGGGTCAT 43329
| | ||||| | || ||||| || |||| |||||| || | | || | ||
Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124
Query 43330 CCGC---GAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCA 43386
|| | | ||| |||| | | ||| || | || || |||| |||| | || |
Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064
Query 43387 TGAGTACGGACTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGATGTGA 43446
|||| |||||| |||||| || || || | || || ||| |||| || ||
Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004
Query 43447 GCGCATCGAAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTCACGAAAC 43506
|||| ||||||||||||| || ||| | ||| |||||||||||| ||| ||
Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944
Query 43507 C---GAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCTCCAA 43563
| || ||||| || || || || ||||| ||||| || |||||||| ||
Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884
Query 43564 CCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTT 43623
||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824
Query 43624 CTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCG-CCGGGCCGTA 43682
|||| |||||||||||||||||| ||| |||| ||||| | || ||| || || || |
Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACGGA 1765
Query 43683 TCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGC 43742
|||| ||||||||||| ||||| || ||| |||||| ||||||||||| |||||| | |
Sbjct 1764 TCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCC 1705
Query 43743 CCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCACGGCCGCAAACACGGCTTCGACT 43802
|||| || || |||||||||||||| ||| || ||||||| ||| || ||||||||||
Sbjct 1704 CCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACT 1645
Query 43803 ACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGC 43862
|| | |||||||||||||| |||||| || ||||| || ||||||||||| ||||| |
Sbjct 1644 ACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCC 1585
Query 43863 TGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATACG 43922
| |||| ||||| | |||| |||| ||| |||||||| |||||||| || || |||
Sbjct 1584 TCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACA 1525
Query 43923 TTCTGCTGTTCCACA 43937
| ||||| |||||||
Sbjct 1524 TCCTGCTCTTCCACA 1510
Score = 147 bits (162), Expect = 8e-31
Identities = 177/237 (75%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 42382 CGGAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG- 42439
||| ||||| |||| ||||| ||||| || |||||||| | | ||| | || |
Sbjct 3194 CGGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGC 3137
Query 42440 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 42499
||| || ||| ||||| ||||| |||| |||| || ||||| || |||||||||
Sbjct 3136 TTCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTAC 3077
Query 42500 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 42559
||| |||||| | |||||||||| | | || ||||| | ||| || || || ||||||
Sbjct 3076 CAGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCG 3017
Query 42560 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGAC 42616
||||| |||||| ||||||||||||| |||||||| || | ||||| | ||||||
Sbjct 3016 TCACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
>seq73813
Length=1303
Score = 86.0 bits (94), Expect = 2e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 35060 GTTGCCAAGGACGTGTGCGAGGCCGCGGGGATTTCGAAGTACCGCGACGCGATCGTCCAA 35119
|| || ||||| |||||||| | || || | ||||| |||||||| ||| ||
Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATCGCCAAGTATCGCGACGCCTTCGCGCAG 118
Query 35120 CTGGACGACGACGAAAGGGTGTACCTGTTCGTGGACACCCCTGGCGGACCGCAACGCATG 35179
|| |||| ||||||||||| || | | ||||||||||| |||||||| || | |||
Sbjct 117 CTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGATG 58
Query 35180 GTCGCGGTCACCGAGGCAGGTGTGTGGTCACTGCTCATGATCAGCCGGTCACCGAAG 35236
| |||| |||| | ||||||| | ||| | | ||||| || || ||||||
Sbjct 57 ACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGAAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 183028569037830
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