Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq67758 105 6e-18 seq222699 104 2e-17 seq39107 104 2e-17 seq78764 100 3e-16 seq44648 98.7 1e-15 seq205188 93.3 4e-14 seq158136 91.5 1e-13 seq54380 91.5 1e-13 seq103069 82.4 7e-11 >seq67758 Length=6344 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||| ||| ||| | | | ||||| || | Sbjct 4644 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTGCGGCCA-TCCTCCAGTT 4586 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || | ||||||||||| || ||||| ||||||||||| |||| Sbjct 4585 GCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCT 4526 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | ||||||| |||||| |||| || | ||| || |||| Sbjct 4525 TGGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGAGTTATGGTCTTACCGG 4466 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || ||||| || ||||| Sbjct 4465 TCAAGGTCTTGACGAAGATTTGCAT 4441 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| |||||||| || | | || | || || | |||||| || Sbjct 5094 GGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTCCTCCCATCTTCCAACTGCTTCCC 5035 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| | || |||| ||||||||| || || || || |||||||| ||| ||| || | Sbjct 5034 TGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC-TGAATTTTCGCCT 4976 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| || || | |||| ||| || || |||| | Sbjct 4975 TCACATTGTCAATGGTGTCAGAACTCTCAACCTCCAGAGTGATGGTCTTCCCAGTCAAGG 4916 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || |||||||||||| Sbjct 4915 TCTTCACAAAAATCTGCATG 4896 >seq222699 Length=2956 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 |||||||| ||||| ||| || || || || |||||||| || |||||| || || Sbjct 672 AGGCACGCGAAGTCGCAGTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTG 613 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||| | ||| | |||| | | ||||| | | |||||||| || ||| Sbjct 612 AGGCCGGGCATCAAGCCGCGCTTCTTTAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAG 553 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||||| ||| ||| |||||||| | |||||||| ||| | | || || Sbjct 552 AAGATTCCCTCGACGCAGGCGAAGGCGACGAGGCGCTCGG-CAAAGGAGTCG--GTGGCA 496 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTTG 120852 |||||||| || |||||| | |||||| ||| Sbjct 495 TCGATCCAGCGCAAGGCCCATTGGGCCTTCTTG 463 >seq39107 Length=55737 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| |||||||||||| | | || | |||||||| || || || Sbjct 41130 GTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTCCCATCCTCGAGTTGTTTACCA 41071 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| | || || || || |||||||| || || ||||| |||||| |||| Sbjct 41070 GCAAAAATTAACCTTTGTTGATCCGGAGGGATACCCTCTTTGTCCTGGATCTTAGCCTTG 41011 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | || || || | ||||| ||| ||||| |||| |||| Sbjct 41010 ACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAAGTT 40951 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 40950 TTCACAAAGATCTGCAT 40934 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| |||||||||||| | | || ||||| || || || || Sbjct 48521 GTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTCCTTCCATCCTCCAGTTGTTTACCA 48462 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| |||| |||||| || ||||||||||| || ||||| |||||| |||| Sbjct 48461 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 48402 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| || || | |||||| || | ||| | |||||| || || | ||| Sbjct 48401 ACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTC 48342 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 48341 TTCACAAAAATCTGCAT 48325 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| |||||||||||| | | || ||||| || || || || Sbjct 49784 GTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTCCTTCCATCCTCCAGTTGTTTACCA 49725 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| |||| |||||| || ||||||||||| || ||||| |||||| |||| Sbjct 49724 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 49665 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| || || | |||||| || | ||| | |||||| || || | ||| Sbjct 49664 ACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTC 49605 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 49604 TTCACAAAAATCTGCAT 49588 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| |||||||||||| | | || ||||| || || || || Sbjct 43467 GTCGACTCCTTCTGAATATTGTAATCGGCAAGGGTCCTTCCATCCTCCAGTTGTTTACCA 43408 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| |||| |||||| || ||||||||||| || ||||| |||||| |||| Sbjct 43407 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 43348 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| || || | |||||| || | ||| | |||||| || || | ||| Sbjct 43347 ACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTC 43288 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 43287 TTCACAAAAATCTGCAT 43271 >seq78764 Length=1181 Score = 100 bits (110), Expect = 3e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| | | ||| ||| | |||||||||||||| || ||| | || Sbjct 415 TTCTGGATGTTGTAGTCGGCGAGGGTGCGACCA-TCCTCGAGCTGCTTTCCGGCGAAGAT 357 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 ||| |||||||| || || || || || |||||||| |||||| ||| | | || Sbjct 356 GAGACGCTGCTGATCCGGCGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTATC 297 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | | ||| || || | ||| | ||| || || || || ||||| ||||| Sbjct 296 GATTGTGTCCGAAGACTCAACCTCAAGGGTAATGGTCTTCCCCGTAAGGGTTTTCACGAA 237 Query 133652 AATCTGCAT 133660 |||||||| Sbjct 236 TATCTGCAT 228 >seq44648 Length=6574 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| ||| || | | | ||||| |||||||| || Sbjct 5507 GTGGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGTCCA-TCCTCAAGCTGCTTTCC 5449 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | || ||||| || ||||| ||||| |||||||| |||||| ||| Sbjct 5448 AGCAAAAATCAACCTTTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGTATCTTTGCCTT 5389 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| |||||| | ||| || || | || | ||||| || || ||||| Sbjct 5388 CACATTGTCAATCGTGTCTGAACTCTCGACCTCCAAAGTAATAGTTTTTCCAGTAAGAGT 5329 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 5328 CTTGACAAAAATCTGCAT 5311 >seq205188 Length=846 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 120658 TGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCT 120717 || || ||||||||||| || || || |||||| || || || || ||||||| ||| Sbjct 1 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCC 60 Query 120718 TTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATG 120777 |||||| |||| |||| | |||||| || || ||||| | ||||| ||| | Sbjct 61 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAG 120 Query 120778 GCAAAGGCGACCATGCGCTCGGCCAA 120803 ||||| ||||| ||||||||||| || Sbjct 121 GCAAATGCGACGATGCGCTCGGCGAA 146 >seq158136 Length=352 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCG-TGGACGAGTCCTCGAG 133513 ||||| | ||| ||||||||||| || ||||||||| | | | | | | | ||||| || Sbjct 226 AAATGCAGGGTAGACTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGGCCA-TCCTCAAG 168 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || ||||||||| |||||||| || ||||| || || ||||| || Sbjct 167 CTGTTTTCCAGCAAAAATGAGCCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCCTGAAT 108 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | | ||||| || | |||| || || || Sbjct 107 CTTAGCCTTGACATTGTCAATGGTGTCAGAGCTTTCCACTTCAAGAGTGATTGTCTTTCC 48 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || || || ||||| Sbjct 47 CGTCAATGTCTTCACAAAGATTTGCAT 21 >seq54380 Length=3212 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| ||| | | ||| ||||||||||||||| || Sbjct 2202 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 2143 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| |||||||| || || ||||| || |||||||| |||||| ||| Sbjct 2142 GCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 2083 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | ||||| | | ||| || || | ||| | |||||| || || Sbjct 2082 ACATTATCGATTGTGTCCGAAGACTCAACCTCAAGGGTAATGGTTTTCCCCGT 2030 >seq103069 Length=208 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 133535 CCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TTGAGCTGCTCAA 133593 || ||||||||| || |||||||| |||||||| ||| ||| || || | | |||| Sbjct 192 CCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC-TGAATTTTGGCCTTCACGTTGTCAA 134 Query 133594 CCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAA 133653 ||||| | | |||||| || | ||| | ||| ||||| || ||||| || ||||||| Sbjct 133 TGGTGTCAGAGCTCTCCACCTCAAGGGTAATGGTCTTGCCCGTAAGAGTCTTAACGAAAA 74 Query 133654 TCTGCAT 133660 ||||||| Sbjct 73 TCTGCAT 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482067010263400