Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 102 7e-17
>seq39107
Length=55737
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||||||||| || || ||||| || |||||||| || ||||| ||
Sbjct 43770 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 43829
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | | |||||| ||| ||| || || || || | ||| |||||
Sbjct 43830 AGATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCA 43889
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| |||||||| | ||| || ||||| | |||||| | ||| | | ||||||||
Sbjct 43890 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTACAA 43949
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| || ||||||||||| || || | || |||||| | || || |||
Sbjct 43950 CATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGA 43998
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||||||||| || || ||||| || |||||||| || ||||| ||
Sbjct 48780 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 48839
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | | |||||| ||| ||| || || || || | ||| |||||
Sbjct 48840 AGATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCA 48899
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| |||||||| | ||| || ||||| | |||||| | || | | ||||||||
Sbjct 48900 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGGACCCTTGCGGATTACAA 48959
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| || ||||||||||| || || | || |||||| | || || |||
Sbjct 48960 CATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGA 49008
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||||||||| || || ||||| || |||||||| || ||||| ||
Sbjct 50043 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 50102
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | | |||||| ||| ||| || || || || | ||| |||||
Sbjct 50103 AGATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCA 50162
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| |||||||| | ||| || ||||| | |||||| | || | | ||||||||
Sbjct 50163 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGGACCCTTGCGGATTACAA 50222
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| || ||||||||||| || || | || |||||| | || || |||
Sbjct 50223 CATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGA 50271
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || ||||| || || |||| || |||||||||||| |||| || |
Sbjct 26780 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 26839
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | |||||| ||| ||| ||||| || ||| | || |||||
Sbjct 26840 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCA 26899
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| |||||||||| ||| || |||||||| |||||| | || ||| || |||||
Sbjct 26900 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 26959
Query 106439 CATACAAAAAGAATCTACACTACA 106462
||| || || ||||| || || ||
Sbjct 26960 CATTCAGAAGGAATCCACCCTCCA 26983
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || ||||| || || |||| || |||||||||||| |||| || |
Sbjct 30103 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 30162
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | |||||| ||| ||| ||||| || ||| | || |||||
Sbjct 30163 TGATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATCA 30222
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| |||||||||| ||| || |||||||| |||||| | || ||| || |||||
Sbjct 30223 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 30282
Query 106439 CATACAAAAAGAATCTACACTACA 106462
||| || || ||||| || || ||
Sbjct 30283 CATTCAGAAGGAATCCACCCTCCA 30306
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || ||||| || || |||| || |||||||||||| |||| || |
Sbjct 41617 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 41676
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | |||||| ||| ||| ||||| || ||| | || |||||
Sbjct 41677 TGATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCA 41736
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| |||||||||| ||| || |||||||| |||||| | || ||| || |||||
Sbjct 41737 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 41796
Query 106439 CATACAAAAAGAATCTACACTACA 106462
||| || || ||||| || || ||
Sbjct 41797 CATTCAGAAGGAATCCACCCTCCA 41820
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| ||||| || || |||| || |||||||||||| |||| || |
Sbjct 17007 ATGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAGAGCTCT 17066
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | ||| | |||||| ||| ||| ||||| || || | || |||||||
Sbjct 17067 GATACAATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGAATCCCACCTGATCAA 17126
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| |||||||| | ||| || || ||||| |||||| | || ||| || |||||
Sbjct 17127 CAGAGGCTTATCTTTGCCGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGACTACAAT 17186
Query 106440 ATACAAAAAGAATCTACACTACA 106462
|| || || |||||||| || ||
Sbjct 17187 ATTCAGAAGGAATCTACCCTGCA 17209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 401231068573280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |