Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026588.1 Length=60285 Score E Sequences producing significant alignments: (Bits) Value seq24349 484 3e-132 >seq24349 Length=3626 Score = 484 bits (536), Expect = 3e-132 Identities = 587/795 (74%), Gaps = 11/795 (1%) Strand=Plus/Minus Query 44963 GGTGATGCTTGGGCAGGGCATGAACCTGCAACAGGCCCATGTCTGTGTCTACATCGGCAT 45022 ||||||||| || ||||||||||||||||| ||||| || |||| | ||||| | Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241 Query 45023 CACACACAAGTTCAACGACCTCATCCAAAGCTTGCACCGGATCCAGCGGTTCGGCCAAAC 45082 ||| |||| ||||||||| ||||| | ||||||| |||||||| ||||| || Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181 Query 45083 CCACCCCTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCAT 45142 | ||||| | || ||||| || |||||||||| || | | || | || Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124 Query 45143 CCGC---GAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATCCA 45199 || | | ||| |||| | | ||| || | || || |||| | | | |||| Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064 Query 45200 CGAGTATGGACTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGA 45259 ||||| ||||| |||||| || || || | || || ||| |||| || ||| Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004 Query 45260 ACGCATCGAAGCCTCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAAC 45319 ||| ||||||| ||||| |||||| | |||| |||||||||||| ||| || Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944 Query 45320 CA---ACAGCATGGCAGACAATTCGGTGGACCTGATCGTCACCAGCATTCCGTTCTCCAA 45376 | || |||||| | || || |||||||||||||| || |||||||| || Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884 Query 45377 CCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTT 45436 ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| || Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824 Query 45437 CTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGG-CGGA 45495 |||| |||||||||||||||||| ||| | || ||||| | || ||| || || |||| Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACGGA 1765 Query 45496 TCTACGCCTGCCATGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCAGGCGTTC 45555 |||| |||||||| || ||||| || ||| |||||||||||||||||| || ||| | | Sbjct 1764 TCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCC 1705 Query 45556 CCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCACGGCCGCAAACACGGCTTCGACT 45615 |||||||||| |||||||||||||| ||| || ||||||| ||| || |||||||||| Sbjct 1704 CCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACT 1645 Query 45616 ACCTCGGCATGATCATCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGC 45675 || | |||||||||| ||| |||||| || ||||| || ||||||||||| ||||| | Sbjct 1644 ACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCC 1585 Query 45676 TGGGCTGGTCCGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACG 45735 | |||| | ||| | |||| |||| ||| ||||||||||| ||||| || || ||| Sbjct 1584 TCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACA 1525 Query 45736 TTCTGTTGTTCCACA 45750 | ||| | ||||||| Sbjct 1524 TCCTGCTCTTCCACA 1510 Score = 165 bits (182), Expect = 3e-36 Identities = 181/237 (76%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 44195 CGGTATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG- 44252 ||| ||||| |||| ||||| ||||| || |||||||| | | ||| | || | Sbjct 3194 CGGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGC 3137 Query 44253 TTCACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTAC 44312 ||| || ||| ||||||||||| |||||||||||| ||||| || ||||||||| Sbjct 3136 TTCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTAC 3077 Query 44313 CAGTCGTTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCC 44372 ||| |||||||| |||||||||| | | || ||||| | ||| |||||||| || || Sbjct 3076 CAGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCG 3017 Query 44373 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGAC 44429 || || |||||| |||||||||||||||||||||| || | ||||| | |||||| Sbjct 3016 TCACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192277497407490