Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026588.1
Length=60285
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 484 3e-132
>seq24349
Length=3626
Score = 484 bits (536), Expect = 3e-132
Identities = 587/795 (74%), Gaps = 11/795 (1%)
Strand=Plus/Minus
Query 44963 GGTGATGCTTGGGCAGGGCATGAACCTGCAACAGGCCCATGTCTGTGTCTACATCGGCAT 45022
||||||||| || ||||||||||||||||| ||||| || |||| | ||||| |
Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241
Query 45023 CACACACAAGTTCAACGACCTCATCCAAAGCTTGCACCGGATCCAGCGGTTCGGCCAAAC 45082
||| |||| ||||||||| ||||| | ||||||| |||||||| ||||| ||
Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181
Query 45083 CCACCCCTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCAT 45142
| ||||| | || ||||| || |||||||||| || | | || | ||
Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124
Query 45143 CCGC---GAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATCCA 45199
|| | | ||| |||| | | ||| || | || || |||| | | | ||||
Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064
Query 45200 CGAGTATGGACTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGA 45259
||||| ||||| |||||| || || || | || || ||| |||| || |||
Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004
Query 45260 ACGCATCGAAGCCTCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAAC 45319
||| ||||||| ||||| |||||| | |||| |||||||||||| ||| ||
Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944
Query 45320 CA---ACAGCATGGCAGACAATTCGGTGGACCTGATCGTCACCAGCATTCCGTTCTCCAA 45376
| || |||||| | || || |||||||||||||| || |||||||| ||
Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884
Query 45377 CCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTT 45436
||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824
Query 45437 CTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGG-CGGA 45495
|||| |||||||||||||||||| ||| | || ||||| | || ||| || || ||||
Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACGGA 1765
Query 45496 TCTACGCCTGCCATGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCAGGCGTTC 45555
|||| |||||||| || ||||| || ||| |||||||||||||||||| || ||| | |
Sbjct 1764 TCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCC 1705
Query 45556 CCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCACGGCCGCAAACACGGCTTCGACT 45615
|||||||||| |||||||||||||| ||| || ||||||| ||| || ||||||||||
Sbjct 1704 CCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACT 1645
Query 45616 ACCTCGGCATGATCATCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGC 45675
|| | |||||||||| ||| |||||| || ||||| || ||||||||||| ||||| |
Sbjct 1644 ACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCC 1585
Query 45676 TGGGCTGGTCCGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACG 45735
| |||| | ||| | |||| |||| ||| ||||||||||| ||||| || || |||
Sbjct 1584 TCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACA 1525
Query 45736 TTCTGTTGTTCCACA 45750
| ||| | |||||||
Sbjct 1524 TCCTGCTCTTCCACA 1510
Score = 165 bits (182), Expect = 3e-36
Identities = 181/237 (76%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44195 CGGTATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG- 44252
||| ||||| |||| ||||| ||||| || |||||||| | | ||| | || |
Sbjct 3194 CGGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGC 3137
Query 44253 TTCACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTAC 44312
||| || ||| ||||||||||| |||||||||||| ||||| || |||||||||
Sbjct 3136 TTCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTAC 3077
Query 44313 CAGTCGTTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCC 44372
||| |||||||| |||||||||| | | || ||||| | ||| |||||||| || ||
Sbjct 3076 CAGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCG 3017
Query 44373 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGAC 44429
|| || |||||| |||||||||||||||||||||| || | ||||| | ||||||
Sbjct 3016 TCACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 192277497407490
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