Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026593.1 Length=59419 Score E Sequences producing significant alignments: (Bits) Value seq24349 479 1e-130 seq73813 86.0 2e-12 >seq24349 Length=3626 Score = 479 bits (530), Expect = 1e-130 Identities = 586/795 (74%), Gaps = 11/795 (1%) Strand=Plus/Minus Query 45073 GGTGATGCTTGGGCAGGGCATGAACCTGCAGCAGGCCCACGTCTGTGTCTACATCGGCAT 45132 ||||||||| || ||||||||||||||||||||||| ||| |||| | ||||| | Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241 Query 45133 CACGCACAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAAC 45192 ||| |||| ||||||||| ||||||| | ||||||| || ||||| ||||| || Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181 Query 45193 CCACCCCTGTACAGCCCATTTGATCCATTCCGAGACCGAACGGGAAGTGGTTCGCATCAT 45252 | |||| | || ||||| | |||| ||||| || | | ||| || Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124 Query 45253 CCGC---GAGAAATGGGCCCAGCACAGAGAGCTGACATCAACTATGACTGACATAATCCA 45309 || | | ||| |||| ||||| |||| || || |||| ||| | |||| Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064 Query 45310 CGAATACGGGCTTGACCCCGAGGCAATCTCGGAAGCGCTGCAACGGTCCATCGGATGCGA 45369 ||| | ||| || |||||| || ||||| | || || || |||| || ||| Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004 Query 45370 ACGAATCGAAGCATCCGGTGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAAC 45429 || ||||||||||||| |||||| | |||| |||||||||||| ||| || Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944 Query 45430 C---GAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACCAGTATTCCGTTCTCCAA 45486 | || ||||| || || || || ||||| ||||| || |||||||| || Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884 Query 45487 CCACTACGAATACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCCCATTT 45546 ||||||||| ||||| || ||||||||||||||||||||||||||||||||| || || Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824 Query 45547 CTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCG-CCGGGCCGTA 45605 |||| |||||||||||||||||| ||| | || ||||| | || ||| || || || | Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACGGA 1765 Query 45606 TCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGTTC 45665 |||| ||||||||||| ||||| || ||| |||||| ||||||||||| || ||| | | Sbjct 1764 TCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCC 1705 Query 45666 CCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCACGGCCGCAAACACGGCTTCGACT 45725 |||||||||| |||||||||||||| ||| || ||||||| ||| || |||||||||| Sbjct 1704 CCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACT 1645 Query 45726 ACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGC 45785 || | |||||||||||||| |||||| || ||||| || ||||||||||| ||||| | Sbjct 1644 ACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCC 1585 Query 45786 TGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACG 45845 | |||| ||||| | |||| |||| ||| ||||||||||| ||||| || || ||| Sbjct 1584 TCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACA 1525 Query 45846 TTCTGCTGTTCCACA 45860 | ||||| ||||||| Sbjct 1524 TCCTGCTCTTCCACA 1510 Score = 147 bits (162), Expect = 8e-31 Identities = 177/237 (75%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 44305 CGGAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG- 44362 ||| ||||| |||| ||||| ||||| || |||||||| | | ||| | || | Sbjct 3194 CGGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGC 3137 Query 44363 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 44422 ||| || ||| ||||| ||||| |||| |||| || ||||| || ||||||||| Sbjct 3136 TTCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTAC 3077 Query 44423 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 44482 ||| |||||| | |||||||||| | | || ||||| | ||| || || || |||||| Sbjct 3076 CAGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCG 3017 Query 44483 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGAC 44539 ||||| |||||| ||||||||||||| |||||||| || | ||||| | |||||| Sbjct 3016 TCACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960 >seq73813 Length=1303 Score = 86.0 bits (94), Expect = 2e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 36983 GTTGCCAAGGACGTGTGCGAGGCCGCGGGGATTTCGAAGTACCGCGACGCGATCGTCCAA 37042 || || ||||| |||||||| | || || | ||||| |||||||| ||| || Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATCGCCAAGTATCGCGACGCCTTCGCGCAG 118 Query 37043 CTGGACGACGACGAAAGGGTGTACCTGTTCGTGGACACCCCTGGCGGACCGCAACGCATG 37102 || |||| ||||||||||| || | | ||||||||||| |||||||| || | ||| Sbjct 117 CTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGATG 58 Query 37103 GTCGCGGTCACCGAGGCAGGTGTGTGGTCACTGCTCATGATCAGCCGGTCACCGAAG 37159 | |||| |||| | ||||||| | ||| | | ||||| || || |||||| Sbjct 57 ACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189513669951270