Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026593.1
Length=59419
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 479 1e-130
seq73813 86.0 2e-12
>seq24349
Length=3626
Score = 479 bits (530), Expect = 1e-130
Identities = 586/795 (74%), Gaps = 11/795 (1%)
Strand=Plus/Minus
Query 45073 GGTGATGCTTGGGCAGGGCATGAACCTGCAGCAGGCCCACGTCTGTGTCTACATCGGCAT 45132
||||||||| || ||||||||||||||||||||||| ||| |||| | ||||| |
Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241
Query 45133 CACGCACAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAAC 45192
||| |||| ||||||||| ||||||| | ||||||| || ||||| ||||| ||
Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181
Query 45193 CCACCCCTGTACAGCCCATTTGATCCATTCCGAGACCGAACGGGAAGTGGTTCGCATCAT 45252
| |||| | || ||||| | |||| ||||| || | | ||| ||
Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124
Query 45253 CCGC---GAGAAATGGGCCCAGCACAGAGAGCTGACATCAACTATGACTGACATAATCCA 45309
|| | | ||| |||| ||||| |||| || || |||| ||| | ||||
Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064
Query 45310 CGAATACGGGCTTGACCCCGAGGCAATCTCGGAAGCGCTGCAACGGTCCATCGGATGCGA 45369
||| | ||| || |||||| || ||||| | || || || |||| || |||
Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004
Query 45370 ACGAATCGAAGCATCCGGTGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAAC 45429
|| ||||||||||||| |||||| | |||| |||||||||||| ||| ||
Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944
Query 45430 C---GAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACCAGTATTCCGTTCTCCAA 45486
| || ||||| || || || || ||||| ||||| || |||||||| ||
Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884
Query 45487 CCACTACGAATACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCCCATTT 45546
||||||||| ||||| || ||||||||||||||||||||||||||||||||| || ||
Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824
Query 45547 CTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCG-CCGGGCCGTA 45605
|||| |||||||||||||||||| ||| | || ||||| | || ||| || || || |
Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACGGA 1765
Query 45606 TCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGTTC 45665
|||| ||||||||||| ||||| || ||| |||||| ||||||||||| || ||| | |
Sbjct 1764 TCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCC 1705
Query 45666 CCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCACGGCCGCAAACACGGCTTCGACT 45725
|||||||||| |||||||||||||| ||| || ||||||| ||| || ||||||||||
Sbjct 1704 CCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACT 1645
Query 45726 ACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGC 45785
|| | |||||||||||||| |||||| || ||||| || ||||||||||| ||||| |
Sbjct 1644 ACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCC 1585
Query 45786 TGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACG 45845
| |||| ||||| | |||| |||| ||| ||||||||||| ||||| || || |||
Sbjct 1584 TCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACA 1525
Query 45846 TTCTGCTGTTCCACA 45860
| ||||| |||||||
Sbjct 1524 TCCTGCTCTTCCACA 1510
Score = 147 bits (162), Expect = 8e-31
Identities = 177/237 (75%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44305 CGGAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG- 44362
||| ||||| |||| ||||| ||||| || |||||||| | | ||| | || |
Sbjct 3194 CGGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGC 3137
Query 44363 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 44422
||| || ||| ||||| ||||| |||| |||| || ||||| || |||||||||
Sbjct 3136 TTCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTAC 3077
Query 44423 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 44482
||| |||||| | |||||||||| | | || ||||| | ||| || || || ||||||
Sbjct 3076 CAGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCG 3017
Query 44483 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGAC 44539
||||| |||||| ||||||||||||| |||||||| || | ||||| | ||||||
Sbjct 3016 TCACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
>seq73813
Length=1303
Score = 86.0 bits (94), Expect = 2e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 36983 GTTGCCAAGGACGTGTGCGAGGCCGCGGGGATTTCGAAGTACCGCGACGCGATCGTCCAA 37042
|| || ||||| |||||||| | || || | ||||| |||||||| ||| ||
Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATCGCCAAGTATCGCGACGCCTTCGCGCAG 118
Query 37043 CTGGACGACGACGAAAGGGTGTACCTGTTCGTGGACACCCCTGGCGGACCGCAACGCATG 37102
|| |||| ||||||||||| || | | ||||||||||| |||||||| || | |||
Sbjct 117 CTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGATG 58
Query 37103 GTCGCGGTCACCGAGGCAGGTGTGTGGTCACTGCTCATGATCAGCCGGTCACCGAAG 37159
| |||| |||| | ||||||| | ||| | | ||||| || || ||||||
Sbjct 57 ACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGAAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189513669951270
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