Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026597.1
Length=63334
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 509 7e-140
>seq24349
Length=3626
Score = 509 bits (564), Expect = 7e-140
Identities = 597/797 (75%), Gaps = 15/797 (2%)
Strand=Plus/Minus
Query 46903 GGTGATGCTCGGGCAGGGCATGAACCTGCAGCAGGCCCACGTCTGTGTCTACATCGGCGT 46962
|||||||||||| ||||||||||||||||||||||| ||| |||| | |||||||
Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241
Query 46963 CACGCACAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATCCAGCGGTTCGGCCA--A 47020
||| |||| ||||||||| ||||||| | ||||||| |||||||| ||||| || |
Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181
Query 47021 ACCCACCCTTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTC 47080
|||| ||| | || ||||| || |||||||||| || | | || | |
Sbjct 2180 GAGCACC--TGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGAC 2126
Query 47081 GTCCGC---GAGAAATGGGCGCAACACCGGGAGTTGACATCAACGATGACCGACATCATC 47137
|| | | ||| |||| | ||| || | || || |||| |||| | |||
Sbjct 2125 ACCCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATC 2066
Query 47138 TACGAGTATGGGCTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGC 47197
||||| || || |||||| || || || | || || ||| |||| || |
Sbjct 2065 CGCGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTC 2006
Query 47198 GAACGCATCGAAGCATCCGGCGAGGGGTGGCTGTTCGCCAACAACGACTGCGTGCCCGAA 47257
|| ||| ||||||||||||| || ||| | |||| ||||||||||||| |||
Sbjct 2005 GAGCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAG 1946
Query 47258 ACC-GAGTCGATG-GGCGACAG-CTCGGTAGATCTGATTGTCACCAGCATTCCGTTCTCA 47314
||| | | | | ||| || | ||| || || ||||| ||||| || ||||||||
Sbjct 1945 ACCCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCG 1886
Query 47315 AACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCAT 47374
||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||
Sbjct 1885 AACCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCAC 1826
Query 47375 TTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGG-CG 47433
|||||| |||||||||||||||||| ||| | || ||||| | || ||| || || ||
Sbjct 1825 TTCTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACG 1767
Query 47434 GATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGT 47493
|||||| ||||||||||| ||||| || ||| |||||| ||||||||||| || ||| |
Sbjct 1766 GATCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCAT 1707
Query 47494 TCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCACGGCCGCAAACACGGCTTCGA 47553
||||||||||| |||||||||||||| ||| || ||||||| ||| || ||||||||
Sbjct 1706 CCCCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGA 1647
Query 47554 CTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCG 47613
|||| | |||||||||||||| |||||| || ||||| || ||||||||||| |||||
Sbjct 1646 CTACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCG 1587
Query 47614 GCTGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATA 47673
|| |||| ||||| | |||| |||| ||| ||||||||||| ||||| || || ||
Sbjct 1586 CCTCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTA 1527
Query 47674 CGTTCTGCTGTTCCACA 47690
| | ||||| |||||||
Sbjct 1526 CATCCTGCTCTTCCACA 1510
Score = 179 bits (198), Expect = 1e-40
Identities = 221/296 (75%), Gaps = 12/296 (4%)
Strand=Plus/Minus
Query 46083 TGCTGGGCATCGAAACCCGGTTCGTTCGCCGCACAGAAGAAGTCGGCGGCGA-TGGT--- 46138
|||| || | ||| ||| ||| | |||||||| || || ||| | | | ||||
Sbjct 3252 TGCTCGGAACCGAGGTCCGCTTCATCCGCCGCACCGATGACATCGACCCCAACTGGTCCG 3193
Query 46139 --ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGAC-ACTGTTT 46195
|||||| |||| |||||||||||||| ||||| || |||| ||| | || | ||
Sbjct 3192 GCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGCTT 3135
Query 46196 ACG--GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACC 46253
|| || ||| ||||||||||| |||||||||||| ||||| || ||||||||||
Sbjct 3134 -CGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTACC 3076
Query 46254 AGTCGTTCCTAGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCCT 46313
|| |||||| | |||||||||| | | || ||||| | ||| |||||||| || || |
Sbjct 3075 AGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCGT 3016
Query 46314 CGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTAATGGAC 46369
| || |||||| |||||||||||||||||||||| || | ||||| | ||||||
Sbjct 3015 CACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 201990968482325
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