Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq24349 509 7e-140 >seq24349 Length=3626 Score = 509 bits (564), Expect = 7e-140 Identities = 597/797 (75%), Gaps = 15/797 (2%) Strand=Plus/Minus Query 46903 GGTGATGCTCGGGCAGGGCATGAACCTGCAGCAGGCCCACGTCTGTGTCTACATCGGCGT 46962 |||||||||||| ||||||||||||||||||||||| ||| |||| | ||||||| Sbjct 2300 GGTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGT 2241 Query 46963 CACGCACAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATCCAGCGGTTCGGCCA--A 47020 ||| |||| ||||||||| ||||||| | ||||||| |||||||| ||||| || | Sbjct 2240 CACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAGCA 2181 Query 47021 ACCCACCCTTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTC 47080 |||| ||| | || ||||| || |||||||||| || | | || | | Sbjct 2180 GAGCACC--TGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGAC 2126 Query 47081 GTCCGC---GAGAAATGGGCGCAACACCGGGAGTTGACATCAACGATGACCGACATCATC 47137 || | | ||| |||| | ||| || | || || |||| |||| | ||| Sbjct 2125 ACCCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATC 2066 Query 47138 TACGAGTATGGGCTTGACCCCGAGGCAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGC 47197 ||||| || || |||||| || || || | || || ||| |||| || | Sbjct 2065 CGCGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTC 2006 Query 47198 GAACGCATCGAAGCATCCGGCGAGGGGTGGCTGTTCGCCAACAACGACTGCGTGCCCGAA 47257 || ||| ||||||||||||| || ||| | |||| ||||||||||||| ||| Sbjct 2005 GAGCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAG 1946 Query 47258 ACC-GAGTCGATG-GGCGACAG-CTCGGTAGATCTGATTGTCACCAGCATTCCGTTCTCA 47314 ||| | | | | ||| || | ||| || || ||||| ||||| || |||||||| Sbjct 1945 ACCCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCG 1886 Query 47315 AACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCAT 47374 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct 1885 AACCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCAC 1826 Query 47375 TTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGG-CG 47433 |||||| |||||||||||||||||| ||| | || ||||| | || ||| || || || Sbjct 1825 TTCTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCT-GCGTCCAGGACG 1767 Query 47434 GATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGT 47493 |||||| ||||||||||| ||||| || ||| |||||| ||||||||||| || ||| | Sbjct 1766 GATCTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCAT 1707 Query 47494 TCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCACGGCCGCAAACACGGCTTCGA 47553 ||||||||||| |||||||||||||| ||| || ||||||| ||| || |||||||| Sbjct 1706 CCCCACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGA 1647 Query 47554 CTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCG 47613 |||| | |||||||||||||| |||||| || ||||| || ||||||||||| ||||| Sbjct 1646 CTACATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCG 1587 Query 47614 GCTGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATA 47673 || |||| ||||| | |||| |||| ||| ||||||||||| ||||| || || || Sbjct 1586 CCTCGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTA 1527 Query 47674 CGTTCTGCTGTTCCACA 47690 | | ||||| ||||||| Sbjct 1526 CATCCTGCTCTTCCACA 1510 Score = 179 bits (198), Expect = 1e-40 Identities = 221/296 (75%), Gaps = 12/296 (4%) Strand=Plus/Minus Query 46083 TGCTGGGCATCGAAACCCGGTTCGTTCGCCGCACAGAAGAAGTCGGCGGCGA-TGGT--- 46138 |||| || | ||| ||| ||| | |||||||| || || ||| | | | |||| Sbjct 3252 TGCTCGGAACCGAGGTCCGCTTCATCCGCCGCACCGATGACATCGACCCCAACTGGTCCG 3193 Query 46139 --ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGAC-ACTGTTT 46195 |||||| |||| |||||||||||||| ||||| || |||| ||| | || | || Sbjct 3192 GCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGCTT 3135 Query 46196 ACG--GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACC 46253 || || ||| ||||||||||| |||||||||||| ||||| || |||||||||| Sbjct 3134 -CGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTACC 3076 Query 46254 AGTCGTTCCTAGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCCT 46313 || |||||| | |||||||||| | | || ||||| | ||| |||||||| || || | Sbjct 3075 AGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCGT 3016 Query 46314 CGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTAATGGAC 46369 | || |||||| |||||||||||||||||||||| || | ||||| | |||||| Sbjct 3015 CACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201990968482325