Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq21506 113 2e-20 >seq21506 Length=5703 Score = 113 bits (124), Expect = 2e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 62756 GGCAATCTGACGAACGATCCCGAATTACGGTTCACGCCGTCCGGCAGCCCGGTGGCCAAC 62815 ||||| || || ||| ||||| | || | ||||| | ||| |||||||| ||| Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCGAAC 5276 Query 62816 TTCACCATTGCCAGCACCCCGCGCACGTTCGACCG-GCAGAGCAACGAGTGGAAGGACGG 62874 |||||||| || || || |||| |||||||| || | | ||||||||||||||||| Sbjct 5275 TTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCG-AACGAGTGGAAGGACGG 5217 Query 62875 GGAAACCCTGTTTTTGCGCGCGAGTATCTGGCGCGACCCCGCGGAGAACGTGGCAGAGTC 62934 ||| | ||||| | ||||| | ||||| || ||| ||| ||||||| | || Sbjct 5216 CGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGGCTC 5157 Query 62935 CCTGACCAAGGGCATGCGCGTGAT 62958 || |||||||||||||||||||| Sbjct 5156 GCTCACCAAGGGCATGCGCGTGAT 5133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227093440369235