Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq80997 223 4e-53 seq95291 203 4e-47 seq13836 165 9e-36 seq78999 105 8e-18 seq55772 98.7 1e-15 seq152218 91.5 2e-13 seq32149 91.5 2e-13 >seq80997 Length=4773 Score = 223 bits (246), Expect = 4e-53 Identities = 315/440 (72%), Gaps = 2/440 (0%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| ||||| ||| | || ||| | || |||| ||||| ||||| | Sbjct 4335 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4394 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||||||||| || | |||||||| ||||| || || |||| || ||||||| | Sbjct 4395 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4453 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || ||||| || || || || || ||| |||| || || | ||||| |||| Sbjct 4454 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4513 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | ||||| |||||||| || |||||| ||| || || ||| | || || || || | Sbjct 4514 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4573 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 ||||||||||||| ||| |||| |||||| | || ||||| ||||||| |||| | | Sbjct 4574 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 4633 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | |||||| | | || | | ||| ||||| |||||||||||||| || | Sbjct 4634 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 4693 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | |||||||| || ||||| ||| ||||||| |||| || | || || | | Sbjct 4694 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTA 4753 Query 158094 CAGTATTCCTAGTCTATCCT 158113 | || ||| | |||||||| Sbjct 4754 CTGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 203 bits (224), Expect = 4e-47 Identities = 289/404 (72%), Gaps = 2/404 (0%) Strand=Plus/Minus Query 157674 ACTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTAC 157733 ||||||| | ||| ||||| | | | || ||| | || |||| ||||| | ||| Sbjct 6063 ACTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTTGATGTTT 6004 Query 157734 TGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCT 157792 ||||||||||||| || | |||||| | ||||| || || |||| || ||||||| Sbjct 6003 TGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTATCGCTGCC 5945 Query 157793 CCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAAC 157852 || || || || ||||| || || || || | ||| |||| || || | ||||| ||| Sbjct 5944 CCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTATGGAAAC 5885 Query 157853 AACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCC 157912 || ||||| | |||||| || |||||| ||| || || ||| | || || || || Sbjct 5884 AATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCG 5825 Query 157913 ATCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTA 157972 |||||||||||||| ||| |||| |||||| | || ||||| ||||||| |||| | Sbjct 5824 ATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATT 5765 Query 157973 GTATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTAC 158032 || | |||||| | | || | | ||| ||||| |||||||||||||| || Sbjct 5764 GTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTT 5705 Query 158033 CGTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCC 158076 ||| | |||||||| || ||||| ||| |||||||| ||||| Sbjct 5704 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661 >seq13836 Length=10167 Score = 165 bits (182), Expect = 9e-36 Identities = 151/188 (80%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 159667 TGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTT 159726 ||| | |||||||||||||||||||| |||| | ||||| || ||| |||| |||||| Sbjct 4479 TGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTACGTCAATTT 4538 Query 159727 GAAATTGCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTAT 159785 ||| ||||||| ||| ||| | || ||||| ||||| | || ||||| ||||| || Sbjct 4539 GAACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAACCGCATTCTCAGGTCCAAT 4597 Query 159786 TGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGC 159845 |||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| Sbjct 4598 TGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGC 4657 Query 159846 ACCTAGTT 159853 || |||| Sbjct 4658 TCCAAGTT 4665 >seq78999 Length=659 Score = 105 bits (116), Expect = 8e-18 Identities = 203/294 (69%), Gaps = 4/294 (1%) Strand=Plus/Minus Query 160084 AACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTT 160143 || ||||| ||||| | ||||| ||||| || | || || | ||| | | || | Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTTCT 262 Query 160144 TTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA-CATCCTCTATTGGCATTATTGGTCT 160202 | ||||| ||||| || || | ||| || ||| ||| || |||| | || || | Sbjct 261 GT-ATGTTATTTGTACCAGTAACTGGTTTACGGATCATTA-CTTTTGGGGTAGTTAGTTT 204 Query 160203 TGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCC 160262 || | ||||| |||||||| || || || | | || ||| | | |||||||||||| Sbjct 203 GGCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCC 144 Query 160263 TGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGAT 160322 | | |||||||| ||||||||||| | || | || || ||||| |||||| ||||| Sbjct 143 TTA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGAT 85 Query 160323 GGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376 || | | ||| | | ||||||||| |||| ||| || | || || ||||| Sbjct 84 GGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31 >seq55772 Length=6464 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903 ||||||||||| || ||||| || || |||||||| || || || || || || || Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309 Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963 || || ||| |||||||||| || |||| || | || || || ||| ||| Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249 Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023 ||| | ||||| || || | |||||||||| | ||||| ||||| || ||||| ||| Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189 Query 159024 TCTGATTGTGTGGTCATGACTGAGCAAG--AGGAGAACCTGTACTGA 159068 | |||||||| | ||| | |||| ||||||| || |||||| Sbjct 1188 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 1144 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903 ||||||||||| || ||||| || || |||||||| || || || || || || || Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777 Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963 || || ||| |||||||||| || |||| || | | || || ||| ||| Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717 Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023 ||| | ||||| || || | |||||||||| | ||||| ||||| || ||||| ||| Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657 Query 159024 TCTGATTGTGTGGTCATGACTGAGCAAG--AGGAGAACCTGTACTGA 159068 | |||||||| | ||| | |||| ||||||| || |||||| Sbjct 3656 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 3612 >seq152218 Length=324 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903 |||||||| || ||||||||||| ||| ||||| || ||| || || | |||||| Sbjct 277 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 218 Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963 || || ||||||||| |||| ||| |||| || || || || ||||| || | Sbjct 217 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 158 Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023 ||| | ||||| || || || | ||||||| | || || || || |||| ||||| Sbjct 157 TTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCACC 98 Query 159024 TCTGA 159028 ||||| Sbjct 97 TCTGA 93 >seq32149 Length=26709 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903 |||||||| || ||||||||||| ||| ||||| || ||| || || | |||||| Sbjct 21038 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 20979 Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963 || || ||||||||| |||| ||| |||| || || || || ||||| || | Sbjct 20978 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 20919 Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023 ||| | ||||| || || || | ||||||| | || || || || |||| ||||| Sbjct 20918 TTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCACC 20859 Query 159024 TCTGA 159028 ||||| Sbjct 20858 TCTGA 20854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571419282102000