Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 223 4e-53
seq95291 203 4e-47
seq13836 165 9e-36
seq78999 105 8e-18
seq55772 98.7 1e-15
seq152218 91.5 2e-13
seq32149 91.5 2e-13
>seq80997
Length=4773
Score = 223 bits (246), Expect = 4e-53
Identities = 315/440 (72%), Gaps = 2/440 (0%)
Strand=Plus/Plus
Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734
|||||| | ||| ||||| ||| | || ||| | || |||| ||||| ||||| |
Sbjct 4335 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4394
Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793
|||||||||||| || | |||||||| ||||| || || |||| || ||||||| |
Sbjct 4395 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4453
Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853
| || || || ||||| || || || || || ||| |||| || || | ||||| ||||
Sbjct 4454 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4513
Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913
| ||||| |||||||| || |||||| ||| || || ||| | || || || || |
Sbjct 4514 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4573
Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973
||||||||||||| ||| |||| |||||| | || ||||| ||||||| |||| | |
Sbjct 4574 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 4633
Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033
| | |||||| | | || | | ||| ||||| |||||||||||||| || |
Sbjct 4634 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 4693
Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093
|| | |||||||| || ||||| ||| ||||||| |||| || | || || | |
Sbjct 4694 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTA 4753
Query 158094 CAGTATTCCTAGTCTATCCT 158113
| || ||| | ||||||||
Sbjct 4754 CTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 203 bits (224), Expect = 4e-47
Identities = 289/404 (72%), Gaps = 2/404 (0%)
Strand=Plus/Minus
Query 157674 ACTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTAC 157733
||||||| | ||| ||||| | | | || ||| | || |||| ||||| | |||
Sbjct 6063 ACTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTTGATGTTT 6004
Query 157734 TGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCT 157792
||||||||||||| || | |||||| | ||||| || || |||| || |||||||
Sbjct 6003 TGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTATCGCTGCC 5945
Query 157793 CCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAAC 157852
|| || || || ||||| || || || || | ||| |||| || || | ||||| |||
Sbjct 5944 CCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTATGGAAAC 5885
Query 157853 AACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCC 157912
|| ||||| | |||||| || |||||| ||| || || ||| | || || || ||
Sbjct 5884 AATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCG 5825
Query 157913 ATCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTA 157972
|||||||||||||| ||| |||| |||||| | || ||||| ||||||| |||| |
Sbjct 5824 ATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATT 5765
Query 157973 GTATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTAC 158032
|| | |||||| | | || | | ||| ||||| |||||||||||||| ||
Sbjct 5764 GTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTT 5705
Query 158033 CGTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCC 158076
||| | |||||||| || ||||| ||| |||||||| |||||
Sbjct 5704 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
>seq13836
Length=10167
Score = 165 bits (182), Expect = 9e-36
Identities = 151/188 (80%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 159667 TGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTT 159726
||| | |||||||||||||||||||| |||| | ||||| || ||| |||| ||||||
Sbjct 4479 TGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTACGTCAATTT 4538
Query 159727 GAAATTGCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTAT 159785
||| ||||||| ||| ||| | || ||||| ||||| | || ||||| ||||| ||
Sbjct 4539 GAACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAACCGCATTCTCAGGTCCAAT 4597
Query 159786 TGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGC 159845
|||||||||||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct 4598 TGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGC 4657
Query 159846 ACCTAGTT 159853
|| ||||
Sbjct 4658 TCCAAGTT 4665
>seq78999
Length=659
Score = 105 bits (116), Expect = 8e-18
Identities = 203/294 (69%), Gaps = 4/294 (1%)
Strand=Plus/Minus
Query 160084 AACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTT 160143
|| ||||| ||||| | ||||| ||||| || | || || | ||| | | || |
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTTCT 262
Query 160144 TTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA-CATCCTCTATTGGCATTATTGGTCT 160202
| ||||| ||||| || || | ||| || ||| ||| || |||| | || || |
Sbjct 261 GT-ATGTTATTTGTACCAGTAACTGGTTTACGGATCATTA-CTTTTGGGGTAGTTAGTTT 204
Query 160203 TGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCC 160262
|| | ||||| |||||||| || || || | | || ||| | | ||||||||||||
Sbjct 203 GGCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCC 144
Query 160263 TGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGAT 160322
| | |||||||| ||||||||||| | || | || || ||||| |||||| |||||
Sbjct 143 TTA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGAT 85
Query 160323 GGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376
|| | | ||| | | ||||||||| |||| ||| || | || || |||||
Sbjct 84 GGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31
>seq55772
Length=6464
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903
||||||||||| || ||||| || || |||||||| || || || || || || ||
Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309
Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963
|| || ||| |||||||||| || |||| || | || || || ||| |||
Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249
Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023
||| | ||||| || || | |||||||||| | ||||| ||||| || ||||| |||
Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189
Query 159024 TCTGATTGTGTGGTCATGACTGAGCAAG--AGGAGAACCTGTACTGA 159068
| |||||||| | ||| | |||| ||||||| || ||||||
Sbjct 1188 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 1144
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903
||||||||||| || ||||| || || |||||||| || || || || || || ||
Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777
Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963
|| || ||| |||||||||| || |||| || | | || || ||| |||
Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717
Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023
||| | ||||| || || | |||||||||| | ||||| ||||| || ||||| |||
Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657
Query 159024 TCTGATTGTGTGGTCATGACTGAGCAAG--AGGAGAACCTGTACTGA 159068
| |||||||| | ||| | |||| ||||||| || ||||||
Sbjct 3656 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 3612
>seq152218
Length=324
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903
|||||||| || ||||||||||| ||| ||||| || ||| || || | ||||||
Sbjct 277 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 218
Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963
|| || ||||||||| |||| ||| |||| || || || || ||||| || |
Sbjct 217 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 158
Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023
||| | ||||| || || || | ||||||| | || || || || |||| |||||
Sbjct 157 TTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCACC 98
Query 159024 TCTGA 159028
|||||
Sbjct 97 TCTGA 93
>seq32149
Length=26709
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903
|||||||| || ||||||||||| ||| ||||| || ||| || || | ||||||
Sbjct 21038 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 20979
Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963
|| || ||||||||| |||| ||| |||| || || || || ||||| || |
Sbjct 20978 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 20919
Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023
||| | ||||| || || || | ||||||| | || || || || |||| |||||
Sbjct 20918 TTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCACC 20859
Query 159024 TCTGA 159028
|||||
Sbjct 20858 TCTGA 20854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571419282102000
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