Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq80997 192 7e-44 seq95291 172 6e-38 seq13836 129 7e-25 seq55772 125 8e-24 seq152218 96.9 4e-15 seq32149 96.9 4e-15 seq221580 82.4 9e-11 >seq80997 Length=4773 Score = 192 bits (212), Expect = 7e-44 Identities = 311/441 (71%), Gaps = 6/441 (1%) Strand=Plus/Plus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 |||||||| ||| | ||| | ||||| ||||| || || |||| || ||||||| || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || || || || || || || ||||| || || |||| || || | ||||| ||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 ||||| |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 ||||||||| || || ||||||||||| | || ||||| ||||||| |||| | || Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 160259 ATTTCACTTCCTTATCG--GCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATAC 160316 | |||||| | | | | | || ||| || ||||| ||||||||||||||| | Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692 Query 160317 CGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCT 160376 ||| | |||||||| || ||||| ||| ||||||| |||| || | || || || Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACT 4752 Query 160377 GCTGTATTCCTCGTATATCCT 160397 |||| ||| | | |||||| Sbjct 4753 ACTGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 172 bits (190), Expect = 6e-38 Identities = 259/362 (72%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 160002 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGT 160060 || ||||| | || |||||||||| ||| | ||| | |||| ||||| || || | Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961 Query 160061 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 160120 ||| || ||||||| || || || || || || || || ||||| | || |||| || Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901 Query 160121 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGG 160180 || | ||||| ||||| ||||| | |||||| || |||| |||| || || || Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841 Query 160181 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 160240 | | || || ||||| ||||||||||| || || ||||||||||| | || ||||| || Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781 Query 160241 TCCTTTCCAACTCGTAGTATTTCACTTCCTTATCG--GCATCTATGCATATATGGGACGT 160298 ||||| |||| | || | |||||| | | | | | || ||| || ||||| ||| Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGT 5723 Query 160299 GAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCT 160358 |||||||||||| | ||| | |||||||| || ||||| ||| |||||||| ||| Sbjct 5722 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 5663 Query 160359 CC 160360 || Sbjct 5662 CC 5661 >seq13836 Length=10167 Score = 129 bits (142), Expect = 7e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 161967 GGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTC 162026 || || || |||| |||||| || ||||| ||||| |||| |||| || |||||| | Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529 Query 162027 CGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCT 162086 ||||| |||||||| || || | || | || || || ||||| | || ||||| Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAACCGCATTCTCA 4589 Query 162087 GGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGG 162146 ||||| |||||||||||||| || |||||||| || ||| |||||||||| ||||| Sbjct 4590 GGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTGG 4649 Query 162147 TTTTTCGCTCC 162157 || || ||||| Sbjct 4650 TTCTTTGCTCC 4660 >seq55772 Length=6464 Score = 125 bits (138), Expect = 8e-24 Identities = 166/227 (73%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 |||||| ||||||||||||| || || |||||||| || || || || || || || Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 || |||||| ||||||| || || ||| |||| ||| |||| || |||||||| || Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249 Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 ||| | ||||| ||| || | | ||||| || | || ||||| | ||||| ||| Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189 Query 161306 AGCGATTGTGTGATTCAAACTGAGCAAG--AGGAGAATCTGTACTGA 161350 |||||||| ||| ||||| | |||| ||||||| || |||||| Sbjct 1188 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 1144 Score = 116 bits (128), Expect = 4e-21 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 |||||| ||||||||||||| || || |||||||| || || || || || || || Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 || |||||| ||||||| || || ||| | || ||| || | || |||||||| || Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717 Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 ||| | ||||| ||| || | | ||||| || | || ||||| | ||||| ||| Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657 Query 161306 AGCGATTGTGTGATTCAAACTGAGCAAG--AGGAGAATCTGTACTGA 161350 |||||||| ||| ||||| | |||| ||||||| || |||||| Sbjct 3656 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 3612 >seq152218 Length=324 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 |||||| | ||||| |||||||| ||| ||||| || ||| || || | |||||| Sbjct 277 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 218 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 ||||||||||||||| | || ||| || | || ||||| |||||||| ||| | | Sbjct 217 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 158 Query 161246 TTCTTGGATGATGACCAGATTGAATCT-GGATTCCTTTTGACATGTGTTGCATATCCTAC 161304 ||| | ||||| ||||| || | ||| ||||| || | || || ||||| || || || Sbjct 157 TTCCTTGATGACGACCAAATCG-GTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCAC 99 >seq32149 Length=26709 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 |||||| | ||||| |||||||| ||| ||||| || ||| || || | |||||| Sbjct 21038 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 20979 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 ||||||||||||||| | || ||| || | || ||||| |||||||| ||| | | Sbjct 20978 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 20919 Query 161246 TTCTTGGATGATGACCAGATTGAATCT-GGATTCCTTTTGACATGTGTTGCATATCCTAC 161304 ||| | ||||| ||||| || | ||| ||||| || | || || ||||| || || || Sbjct 20918 TTCCTTGATGACGACCAAATCG-GTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCAC 20860 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 ||| || | ||||| |||||||| | ||| |||| || ||| || || | |||||| Sbjct 14108 TACGTTCTTGATGCTGCAGAAGAAGTAGGCATTGACCTTCCCTACTCATGCAGGGCTGGT 14049 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 ||||||||||||| || | |||||| | || || ||| |||||||| ||| | Sbjct 14048 TCTTGCTCTTCCTGCGCCGCCAAAATTGTCTCCGGCCAAGTCGACCAGTCAGACGGTAAC 13989 Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGC 161295 ||| | ||||| ||||||||||| | || || || | || || ||||| Sbjct 13988 TTCCTTGATGACGACCAGATTGATGCAGGCTTTGTTCTCACCTGCGTTGC 13939 >seq221580 Length=2368 Score = 82.4 bits (90), Expect = 9e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAAC-TATTCTTGTCGTGCTGG 161184 |||||| | ||| |||| |||||||| ||| | || | || | || || || | ||||| Sbjct 1585 TACATTCTGGATTCAGCTGAAGAGGCTGGATTGGA-ACTACCATACTCATGCAGAGCTGG 1643 Query 161185 TGCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTC 161244 || |||||| | ||||| || | | | ||||||| | || || ||||| || || || Sbjct 1644 AGCATGCTCTACTTGTGCTGGAAGACTGGATTCAGGTGCTGTGGATCAGTCAGATCAATC 1703 Query 161245 CTTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTAC 161304 || | || || | ||||| || || | |||| | |||||||| |||| || || Sbjct 1704 TTTTCTTGAAGAACAGCAGATAGAGAAAGGTTACCTTCTCACATGTGTCTCATACCCGAC 1763 Query 161305 TAGCGATTGTGTGATTCAAACTGAGCAAGAGGAGAATCT 161343 |||||||||||| | || | | ||||| |||| Sbjct 1764 ATCAGATTGTGTGATTTACACCCACAAGGAGGAAGATCT 1802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557937144017000