Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 192 7e-44
seq95291 172 6e-38
seq13836 129 7e-25
seq55772 125 8e-24
seq152218 96.9 4e-15
seq32149 96.9 4e-15
seq221580 82.4 9e-11
>seq80997
Length=4773
Score = 192 bits (212), Expect = 7e-44
Identities = 311/441 (71%), Gaps = 6/441 (1%)
Strand=Plus/Plus
Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019
||||| | ||| |||| ||| | || || || || | || ||||| || || ||
Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395
Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078
|||||||| ||| | ||| | ||||| ||||| || || |||| || ||||||| ||
Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454
Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138
|| || || || || || || ||||| || || |||| || || | ||||| |||||
Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514
Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198
||||| |||||||| || |||| |||| || || ||| | || || ||||| ||
Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574
Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258
||||||||| || || ||||||||||| | || ||||| ||||||| |||| | ||
Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634
Query 160259 ATTTCACTTCCTTATCG--GCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATAC 160316
| |||||| | | | | | || ||| || ||||| ||||||||||||||| |
Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692
Query 160317 CGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCT 160376
||| | |||||||| || ||||| ||| ||||||| |||| || | || || ||
Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACT 4752
Query 160377 GCTGTATTCCTCGTATATCCT 160397
|||| ||| | | ||||||
Sbjct 4753 ACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 172 bits (190), Expect = 6e-38
Identities = 259/362 (72%), Gaps = 6/362 (2%)
Strand=Plus/Minus
Query 160002 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGT 160060
|| ||||| | || |||||||||| ||| | ||| | |||| ||||| || || |
Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961
Query 160061 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 160120
||| || ||||||| || || || || || || || || ||||| | || |||| ||
Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901
Query 160121 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGG 160180
|| | ||||| ||||| ||||| | |||||| || |||| |||| || || ||
Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841
Query 160181 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 160240
| | || || ||||| ||||||||||| || || ||||||||||| | || ||||| ||
Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781
Query 160241 TCCTTTCCAACTCGTAGTATTTCACTTCCTTATCG--GCATCTATGCATATATGGGACGT 160298
||||| |||| | || | |||||| | | | | | || ||| || ||||| |||
Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGT 5723
Query 160299 GAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCT 160358
|||||||||||| | ||| | |||||||| || ||||| ||| |||||||| |||
Sbjct 5722 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 5663
Query 160359 CC 160360
||
Sbjct 5662 CC 5661
>seq13836
Length=10167
Score = 129 bits (142), Expect = 7e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 161967 GGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTC 162026
|| || || |||| |||||| || ||||| ||||| |||| |||| || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 162027 CGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCT 162086
||||| |||||||| || || | || | || || || ||||| | || |||||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAACCGCATTCTCA 4589
Query 162087 GGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGG 162146
||||| |||||||||||||| || |||||||| || ||| |||||||||| |||||
Sbjct 4590 GGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTGG 4649
Query 162147 TTTTTCGCTCC 162157
|| || |||||
Sbjct 4650 TTCTTTGCTCC 4660
>seq55772
Length=6464
Score = 125 bits (138), Expect = 8e-24
Identities = 166/227 (73%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185
|||||| ||||||||||||| || || |||||||| || || || || || || ||
Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309
Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245
|| |||||| ||||||| || || ||| |||| ||| |||| || |||||||| ||
Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249
Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305
||| | ||||| ||| || | | ||||| || | || ||||| | ||||| |||
Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189
Query 161306 AGCGATTGTGTGATTCAAACTGAGCAAG--AGGAGAATCTGTACTGA 161350
|||||||| ||| ||||| | |||| ||||||| || ||||||
Sbjct 1188 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 1144
Score = 116 bits (128), Expect = 4e-21
Identities = 164/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185
|||||| ||||||||||||| || || |||||||| || || || || || || ||
Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777
Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245
|| |||||| ||||||| || || ||| | || ||| || | || |||||||| ||
Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717
Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305
||| | ||||| ||| || | | ||||| || | || ||||| | ||||| |||
Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657
Query 161306 AGCGATTGTGTGATTCAAACTGAGCAAG--AGGAGAATCTGTACTGA 161350
|||||||| ||| ||||| | |||| ||||||| || ||||||
Sbjct 3656 GCAGATTGTGTAATTGAAACTCA-CAAGGAAGGAGAA-CTCTACTGA 3612
>seq152218
Length=324
Score = 96.9 bits (106), Expect = 4e-15
Identities = 131/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185
|||||| | ||||| |||||||| ||| ||||| || ||| || || | ||||||
Sbjct 277 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 218
Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245
||||||||||||||| | || ||| || | || ||||| |||||||| ||| | |
Sbjct 217 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 158
Query 161246 TTCTTGGATGATGACCAGATTGAATCT-GGATTCCTTTTGACATGTGTTGCATATCCTAC 161304
||| | ||||| ||||| || | ||| ||||| || | || || ||||| || || ||
Sbjct 157 TTCCTTGATGACGACCAAATCG-GTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCAC 99
>seq32149
Length=26709
Score = 96.9 bits (106), Expect = 4e-15
Identities = 131/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185
|||||| | ||||| |||||||| ||| ||||| || ||| || || | ||||||
Sbjct 21038 TACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGGCTGGT 20979
Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245
||||||||||||||| | || ||| || | || ||||| |||||||| ||| | |
Sbjct 20978 GCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGACAATAGC 20919
Query 161246 TTCTTGGATGATGACCAGATTGAATCT-GGATTCCTTTTGACATGTGTTGCATATCCTAC 161304
||| | ||||| ||||| || | ||| ||||| || | || || ||||| || || ||
Sbjct 20918 TTCCTTGATGACGACCAAATCG-GTCTAGGATTTGTTCTCACCTGCGTTGCTTACCCCAC 20860
Score = 91.5 bits (100), Expect = 2e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185
||| || | ||||| |||||||| | ||| |||| || ||| || || | ||||||
Sbjct 14108 TACGTTCTTGATGCTGCAGAAGAAGTAGGCATTGACCTTCCCTACTCATGCAGGGCTGGT 14049
Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245
||||||||||||| || | |||||| | || || ||| |||||||| ||| |
Sbjct 14048 TCTTGCTCTTCCTGCGCCGCCAAAATTGTCTCCGGCCAAGTCGACCAGTCAGACGGTAAC 13989
Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGC 161295
||| | ||||| ||||||||||| | || || || | || || |||||
Sbjct 13988 TTCCTTGATGACGACCAGATTGATGCAGGCTTTGTTCTCACCTGCGTTGC 13939
>seq221580
Length=2368
Score = 82.4 bits (90), Expect = 9e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAAC-TATTCTTGTCGTGCTGG 161184
|||||| | ||| |||| |||||||| ||| | || | || | || || || | |||||
Sbjct 1585 TACATTCTGGATTCAGCTGAAGAGGCTGGATTGGA-ACTACCATACTCATGCAGAGCTGG 1643
Query 161185 TGCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTC 161244
|| |||||| | ||||| || | | | ||||||| | || || ||||| || || ||
Sbjct 1644 AGCATGCTCTACTTGTGCTGGAAGACTGGATTCAGGTGCTGTGGATCAGTCAGATCAATC 1703
Query 161245 CTTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTAC 161304
|| | || || | ||||| || || | |||| | |||||||| |||| || ||
Sbjct 1704 TTTTCTTGAAGAACAGCAGATAGAGAAAGGTTACCTTCTCACATGTGTCTCATACCCGAC 1763
Query 161305 TAGCGATTGTGTGATTCAAACTGAGCAAGAGGAGAATCT 161343
|||||||||||| | || | | ||||| ||||
Sbjct 1764 ATCAGATTGTGTGATTTACACCCACAAGGAGGAAGATCT 1802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557937144017000
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