Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 201 1e-46
seq95291 170 2e-37
seq78999 138 1e-27
seq13836 114 2e-20
seq76780 86.0 8e-12
>seq80997
Length=4773
Score = 201 bits (222), Expect = 1e-46
Identities = 313/442 (71%), Gaps = 8/442 (2%)
Strand=Plus/Plus
Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040
||||| | ||| |||| ||| | || || || || | || ||||| || || ||
Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395
Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099
|||||||| ||| | ||| | |||||| ||||| || || |||| || ||||||| ||
Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454
Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159
|| || || || || || || ||||| || || |||| || || | ||||| |||||
Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514
Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219
||||| |||||||| || |||| |||| || || ||| | || || ||||| ||
Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574
Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279
||||||||| || || ||||||||||| | || ||||| ||||||| |||| | ||
Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634
Query 181280 CTTTCACTTCCTTATCGGCATTTA---TGCATACATGGGACGTGAATGGGAACTCTCTTA 181336
| |||||| | | || | || ||| |||||||| ||||| |||||||| ||
Sbjct 4635 TCTACACTTCTTACTTGG--TGTAGCTTGC-TACATGGGTCGTGAGTGGGAACTTAGTTT 4691
Query 181337 CCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATC 181396
|| | |||||||| || ||||| ||||||||| | |||| || | ||| || |
Sbjct 4692 TCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTAC 4751
Query 181397 TGCTGTATTCCTAGTCTATCCT 181418
| |||| ||| | ||||||||
Sbjct 4752 TACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 170 bits (188), Expect = 2e-37
Identities = 259/363 (71%), Gaps = 8/363 (2%)
Strand=Plus/Minus
Query 181023 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGT 181081
|| ||||| | || |||||||||| ||| | ||| | |||| | ||||| || || |
Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961
Query 181082 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 181141
||| || ||||||| || || || || || || || || ||||| | || |||| ||
Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901
Query 181142 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGG 181201
|| | ||||| ||||| ||||| | |||||| || |||| |||| || || ||
Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841
Query 181202 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 181261
| | || || ||||| ||||||||||| || || ||||||||||| | || ||||| ||
Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781
Query 181262 TCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTA---TGCATACATGGGACG 181318
||||| |||| | || | |||||| | | || | || ||| |||||||| ||
Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--TGTAGCTTGC-TACATGGGTCG 5724
Query 181319 TGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGC 181378
||| |||||||| || || | |||||||| || ||||| ||||||||| || ||
Sbjct 5723 TGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGC 5664
Query 181379 TCC 181381
|||
Sbjct 5663 TCC 5661
>seq78999
Length=659
Score = 138 bits (152), Expect = 1e-27
Identities = 208/293 (71%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 183066 AATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTC 183125
||||| ||||||||| ||||||| |||||| || |||||| ||||||| | |||
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACG-TTC 263
Query 183126 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTT 183185
| |||||| ||||| || || | ||| | || || | || ||||| | || | |
Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203
Query 183186 GCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCT 183245
|| || || || ||||||||||| ||||| | |||| ||| | | |||||||||||||
Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143
Query 183246 GAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTG 183305
| || ||||| |||||||| || | || | | || ||||| | |||| ||| ||
Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84
Query 183306 GCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACC 183358
| | | ||| | | ||||||||| | || ||| || |||| ||||||||
Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31
>seq13836
Length=10167
Score = 114 bits (126), Expect = 2e-20
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 182640 GGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTT 182699
|| || || |||| ||| || |||||||||||||| |||| | || || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 182700 AGGCAATTTGAACTTGCTCG-CCTGATTGGAATCAGACCTTACAATGCGATTGCTTTTTC 182758
| ||||||||||||||||| ||| || | | ||||||| ||||| | || || ||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTG-TTCAATTGCGACCTTATAATGCAACCGCATTCTC 4588
Query 182759 TGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTG 182818
||||| |||||||| || || ||| ||||| || ||||| |||| ||||| |||
Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648
Query 182819 GTTTTTCGCGCC 182830
||| || || ||
Sbjct 4649 GTTCTTTGCTCC 4660
>seq76780
Length=5561
Score = 86.0 bits (94), Expect = 8e-12
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 182513 TTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTA 182571
||| ||| | ||||| ||| ||||| | || || || || || || || ||| || |
Sbjct 406 TTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTT 348
Query 182572 TGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGT 182631
| | || ||| | | |||| ||||||||||| | ||||| ||||| | ||||
Sbjct 347 TAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTGTTGGT 288
Query 182632 GCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTT 182691
| || | || || || |||| ||| || ||| |||||||||| |||| | || ||||
Sbjct 287 GTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAATAGGTT 228
Query 182692 TCATGCTTAGGCAATTTGAACTTGCT 182717
||||| | | ||||||||||| ||
Sbjct 227 TCATGTTACGTTAATTTGAACTTTCT 202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 612896401824800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |