Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq80997 201 1e-46 seq95291 170 2e-37 seq78999 138 1e-27 seq13836 114 2e-20 seq76780 86.0 8e-12 >seq80997 Length=4773 Score = 201 bits (222), Expect = 1e-46 Identities = 313/442 (71%), Gaps = 8/442 (2%) Strand=Plus/Plus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099 |||||||| ||| | ||| | |||||| ||||| || || |||| || ||||||| || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 || || || || || || || ||||| || || |||| || || | ||||| ||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 ||||| |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279 ||||||||| || || ||||||||||| | || ||||| ||||||| |||| | || Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 181280 CTTTCACTTCCTTATCGGCATTTA---TGCATACATGGGACGTGAATGGGAACTCTCTTA 181336 | |||||| | | || | || ||| |||||||| ||||| |||||||| || Sbjct 4635 TCTACACTTCTTACTTGG--TGTAGCTTGC-TACATGGGTCGTGAGTGGGAACTTAGTTT 4691 Query 181337 CCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATC 181396 || | |||||||| || ||||| ||||||||| | |||| || | ||| || | Sbjct 4692 TCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTAC 4751 Query 181397 TGCTGTATTCCTAGTCTATCCT 181418 | |||| ||| | |||||||| Sbjct 4752 TACTGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 170 bits (188), Expect = 2e-37 Identities = 259/363 (71%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 181023 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGT 181081 || ||||| | || |||||||||| ||| | ||| | |||| | ||||| || || | Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961 Query 181082 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 181141 ||| || ||||||| || || || || || || || || ||||| | || |||| || Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901 Query 181142 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGG 181201 || | ||||| ||||| ||||| | |||||| || |||| |||| || || || Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841 Query 181202 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 181261 | | || || ||||| ||||||||||| || || ||||||||||| | || ||||| || Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781 Query 181262 TCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTA---TGCATACATGGGACG 181318 ||||| |||| | || | |||||| | | || | || ||| |||||||| || Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--TGTAGCTTGC-TACATGGGTCG 5724 Query 181319 TGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGC 181378 ||| |||||||| || || | |||||||| || ||||| ||||||||| || || Sbjct 5723 TGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGC 5664 Query 181379 TCC 181381 ||| Sbjct 5663 TCC 5661 >seq78999 Length=659 Score = 138 bits (152), Expect = 1e-27 Identities = 208/293 (71%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 183066 AATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTC 183125 ||||| ||||||||| ||||||| |||||| || |||||| ||||||| | ||| Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACG-TTC 263 Query 183126 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTT 183185 | |||||| ||||| || || | ||| | || || | || ||||| | || | | Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203 Query 183186 GCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCT 183245 || || || || ||||||||||| ||||| | |||| ||| | | ||||||||||||| Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143 Query 183246 GAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTG 183305 | || ||||| |||||||| || | || | | || ||||| | |||| ||| || Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84 Query 183306 GCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACC 183358 | | | ||| | | ||||||||| | || ||| || |||| |||||||| Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31 >seq13836 Length=10167 Score = 114 bits (126), Expect = 2e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 182640 GGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTT 182699 || || || |||| ||| || |||||||||||||| |||| | || || |||||| | Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529 Query 182700 AGGCAATTTGAACTTGCTCG-CCTGATTGGAATCAGACCTTACAATGCGATTGCTTTTTC 182758 | ||||||||||||||||| ||| || | | ||||||| ||||| | || || || Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTG-TTCAATTGCGACCTTATAATGCAACCGCATTCTC 4588 Query 182759 TGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTG 182818 ||||| |||||||| || || ||| ||||| || ||||| |||| ||||| ||| Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648 Query 182819 GTTTTTCGCGCC 182830 ||| || || || Sbjct 4649 GTTCTTTGCTCC 4660 >seq76780 Length=5561 Score = 86.0 bits (94), Expect = 8e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 182513 TTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTA 182571 ||| ||| | ||||| ||| ||||| | || || || || || || || ||| || | Sbjct 406 TTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTT 348 Query 182572 TGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGT 182631 | | || ||| | | |||| ||||||||||| | ||||| ||||| | |||| Sbjct 347 TAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTGTTGGT 288 Query 182632 GCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTT 182691 | || | || || || |||| ||| || ||| |||||||||| |||| | || |||| Sbjct 287 GTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAATAGGTT 228 Query 182692 TCATGCTTAGGCAATTTGAACTTGCT 182717 ||||| | | ||||||||||| || Sbjct 227 TCATGTTACGTTAATTTGAACTTTCT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612896401824800