Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 237 2e-57
seq95291 210 3e-49
seq13836 102 1e-16
seq78999 96.9 5e-15
>seq80997
Length=4773
Score = 237 bits (262), Expect = 2e-57
Identities = 305/418 (73%), Gaps = 2/418 (0%)
Strand=Plus/Plus
Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548
||| | |||||||||||| | || ||||| |||||| | ||||||||||| || || |
Sbjct 4357 ACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACT 4416
Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607
|||||| | ||| || ||||||||||| | | ||| || ||||| || || || || ||
Sbjct 4417 GCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTAT 4475
Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667
||||| || || |||| || || | ||||||||||| ||||| |||||||| || |
Sbjct 4476 TCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTAT 4535
Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727
||||| ||| || || ||| | || || || || |||||||||||||| | | ||
Sbjct 4536 TCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGA 4595
Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTAT 174787
|| ||| | |||||||| ||||||| ||||| |||| | |||||| | ||||| |
Sbjct 4596 TGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT 4655
Query 174788 CTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGAT 174847
||| ||||| |||||||||||||| || |||| | |||||| | ||||||||
Sbjct 4656 AGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT 4715
Query 174848 CTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCT 174905
||| ||||| | || | |||| ||| ||| | | || ||| | ||||||||
Sbjct 4716 TGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 210 bits (232), Expect = 3e-49
Identities = 297/412 (72%), Gaps = 4/412 (1%)
Strand=Plus/Minus
Query 174459 TGGGATCAGTTTTGTTCCTGGGTCAC-ATCAACCAACAATCGTCTTTACGTCGGTTGGTT 174517
|||| ||| || ||| ||| | || | || | || |||||||||||| | || |||||
Sbjct 6070 TGGGGTCACTTCTGTAATTGGATAACCAACATCGAA-AATCGTCTTTACATTGGATGGTT 6012
Query 174518 CGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACTGTATGT-TTCATTATCGCTTTCG 174576
| |||| | ||||||||||| || || | |||| | | ||| || |||||||||||
Sbjct 6011 TGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTA 5953
Query 174577 TGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGT 174636
| | ||| || ||||| || || || || || ||||| | || |||| || || | |
Sbjct 5952 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTT 5893
Query 174637 ATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACT 174696
|||||||||| ||||| | |||||| || |||||| ||| || || ||| | || |
Sbjct 5892 ATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATT 5833
Query 174697 TCTACCCAATCTGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCC 174756
| || || |||||||||||||| | | || || ||| | |||||||| |||||||
Sbjct 5832 TTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATG 5773
Query 174757 AACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAAC 174816
||||| |||| | |||||| | ||||| | ||| ||||| |||||||||||||
Sbjct 5772 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAAC 5713
Query 174817 TCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACC 174868
| || |||| | |||||| | |||||||| ||| ||||| || || ||
Sbjct 5712 TTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
>seq13836
Length=10167
Score = 102 bits (112), Expect = 1e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 176130 GGAGGGCTTTGGTCCTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTT 176189
|| || || ||| | |||||||||||||||||||| |||| | || || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 176190 CGTCAGTTTGAACTGGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGT 176249
||||| |||||||| || || || | || || || || || | ||||||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAACCGCATTCTCA 4589
Query 176250 GGTCCTATCGCTGTATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGG 176309
||||| || ||||| ||||| ||| || ||| | || ||||| ||||| ||| |||
Sbjct 4590 GGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTGG 4649
Query 176310 TTCTTTGCCCC 176320
|||||||| ||
Sbjct 4650 TTCTTTGCTCC 4660
>seq78999
Length=659
Score = 96.9 bits (106), Expect = 5e-15
Identities = 201/294 (68%), Gaps = 4/294 (1%)
Strand=Plus/Minus
Query 176556 AACCGCTTCTGGTCGCAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTC 176615
|| ||||| ||||| ||||||| |||||| || ||||| ||||| | | |||
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACG-TTC 263
Query 176616 TTTATGTTGTTTGTCCCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTT 176675
| |||||| ||||| || || | ||| | || || | | |||| | || | |
Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203
Query 176676 GCTCTTAATCTTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCT 176735
|| || || || ||||||||||| ||||| |||| ||| | | |||||||||||||
Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143
Query 176736 GAGTTTGAAACTTTCTACACAAAGAACATCCTTCTT-AACGAAGGACTAAGAGCATGGAT 176794
| ||||| ||||||||||| || | || ||||| |||||||| | | | |||||
Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTAT-TTTCTTAAACGAAGGTATTCGTGGGTGGAT 85
Query 176795 GGCACCTGTGGATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACC 176848
|| | | ||| | | ||||| || ||||| | |||| ||||||||
Sbjct 84 GGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 727885477775800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |