Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 210 3e-49
seq95291 185 1e-41
seq13836 109 7e-19
seq76780 86.0 8e-12
>seq80997
Length=4773
Score = 210 bits (232), Expect = 3e-49
Identities = 315/441 (71%), Gaps = 6/441 (1%)
Strand=Plus/Plus
Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908
||||| | ||| |||| ||| | || || || || | || ||||| || || ||
Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395
Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967
|||||||| ||| | ||| | |||||| ||||| || || |||| || ||||||| ||
Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454
Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027
|| || || || || || || ||||| || || |||| || || | ||||| |||||
Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514
Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087
||||| |||||||| || |||| |||| || || ||| | || || ||||| ||
Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574
Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147
||||||||| || || ||||||||||| | || ||||| ||||||| |||| | ||
Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634
Query 178148 ATTTCACTTCCTCATTG--GTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATAC 178205
| |||||| | ||| ||| || ||| |||||||| ||||||||||||||| |
Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692
Query 178206 CGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCG 178265
||| | |||||||| || ||||| ||| ||||| | |||| || | ||| || |
Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACT 4752
Query 178266 GCAGTATTCCTGGTCTATCCT 178286
| || ||| || ||||||||
Sbjct 4753 ACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 185 bits (204), Expect = 1e-41
Identities = 262/362 (72%), Gaps = 6/362 (2%)
Strand=Plus/Minus
Query 177891 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGT 177949
|| ||||| | || |||||||||| ||| | ||| | |||| | ||||| || || |
Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961
Query 177950 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 178009
||| || ||||||| || || || || || || || || ||||| | || |||| ||
Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901
Query 178010 ACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGG 178069
|| | ||||| ||||| ||||| | |||||| || |||| |||| || || ||
Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841
Query 178070 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 178129
| | || || ||||| ||||||||||| || || ||||||||||| | || ||||| ||
Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781
Query 178130 TCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTAT--CTATGCATACATGGGACGT 178187
||||| |||| | || | |||||| | ||||| | || ||| |||||||| |||
Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGT 5723
Query 178188 GAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCT 178247
|||||||||||| | ||| | |||||||| || ||||| ||| ||||| || |||
Sbjct 5722 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 5663
Query 178248 CC 178249
||
Sbjct 5662 CC 5661
>seq13836
Length=10167
Score = 109 bits (120), Expect = 7e-19
Identities = 141/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 179502 GGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTT 179561
|| || || |||| ||| || |||||||||||||| |||| | || || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 179562 AGGCAATTTGAACTTGCTCG-CCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTC 179620
| ||||||||||||||||| ||| || | ||||||| ||||| | || || ||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTG-TTCAATTGCGACCTTATAATGCAACCGCATTCTC 4588
Query 179621 TGGTCCTATTGCTGTATTCGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTG 179680
||||| |||||||| || || ||| ||||| || ||||| |||| ||||| |||
Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648
Query 179681 GTTTTTCGCGCC 179692
||| || || ||
Sbjct 4649 GTTCTTTGCTCC 4660
>seq76780
Length=5561
Score = 86.0 bits (94), Expect = 8e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 179370 GCTAGTTCCTATCTTGAGGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGA 179428
|| ||||| ||| | || || ||| ||||| | || || || || || || || ||| |
Sbjct 411 GCAAGTTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAA 353
Query 179429 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCG 179488
| | | | || ||| | | |||| ||||||||||| | ||||| ||||| |
Sbjct 352 TAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTG 293
Query 179489 GTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCAT 179548
||||| || | || || || |||| ||| || ||| |||||||||| |||| | ||
Sbjct 292 TTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAAT 233
Query 179549 TGGTTTCATGCTTAGGCAATTTGAACTTGCT 179579
||||||||| | | ||||||||||| ||
Sbjct 232 AGGTTTCATGTTACGTTAATTTGAACTTTCT 202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 604312507990800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |