Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq51459 86.0 5e-12 >seq51459 Length=25718 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 41079 CAGTTTTACGTTTGCAA-TGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACAT 41137 |||||||||| | |||| ||| ||| | || |||||| ||||||| |||| | ||||| Sbjct 12167 CAGTTTTACG-TAGCAAGTGGGGAATTATCGTGTCAAATGTATCAGCGATCTGCGGACAT 12225 Query 41138 GGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACA 41197 ||| || ||||| || ||||| || || ||||||||| || || | |||||||| || Sbjct 12226 GGGCCTGGGGGTGCCATTTAATATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCA 12285 Query 41198 CGTT 41201 ||| Sbjct 12286 TGTT 12289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396370775580175