Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 111 1e-19
seq78764 109 5e-19
seq158136 98.7 8e-16
seq54380 96.9 3e-15
>seq39107
Length=55737
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||| || | ||||| || | ||| || || || ||||||||||| |||
Sbjct 41162 TGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGG 41103
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | | || ||||| |||||||| || |||| | | ||||||||||| |
Sbjct 41102 CAAGGGTTCTCCCATCCTCGAGTTGTTTACCAGCAAAAATTAACCTTTGTTGATCCGGAG 41043
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||||||||| || |||||| || | | || | ||||| | | ||| |
Sbjct 41042 GGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTA 40983
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| || || || | ||||| |||| ||||||||||||||| |||||
Sbjct 40982 CTTCAAGGGTGATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 40934
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||| || | ||||| || | ||| || || |||||||| ||||| ||
Sbjct 26325 TGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAG 26266
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | |||| || || |||||||| ||| |||| | | ||| |||||||| |
Sbjct 26265 CAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAG 26206
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||| ||||| || |||||| |||| | || | || || | || ||| |
Sbjct 26205 GGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCA 26146
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || |||| ||| || |||| ||||||||| |||||||||||
Sbjct 26145 CCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 26097
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||| || | ||||| || | ||| || || |||||||| ||||| ||
Sbjct 29648 TGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAG 29589
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | |||| || || |||||||| ||| |||| | | ||| |||||||| |
Sbjct 29588 CAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAG 29529
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||| ||||| || |||||| |||| | || | || || | || ||| |
Sbjct 29528 GGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCA 29469
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || |||| ||| || |||| ||||||||| |||||||||||
Sbjct 29468 CCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 29420
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||| || | ||||| || | ||| || || |||||||| ||||| ||
Sbjct 46579 TGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAG 46520
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | |||| || || |||||||| ||| |||| | | ||| |||||||| |
Sbjct 46519 CAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAG 46460
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||| ||||| || |||||| |||| | || | || || | || ||| |
Sbjct 46459 GGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCA 46400
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || |||| ||| || |||| ||||||||| |||||||||||
Sbjct 46399 CCTCCAGGGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 46351
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || || | || ||| ||||| || | ||||| ||||| || || || || ||
Sbjct 16779 TGCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCG 16720
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | ||||| |||||||| ||||| | || || | ||| || || || |
Sbjct 16719 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGG 16660
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| ||||| |||||| ||| | | || | || |||| || |
Sbjct 16659 GAATACCCTCCTTATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCA 16600
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || | || |||| ||| || |||| ||| |||||||||||||||||
Sbjct 16599 CCTCCAAGGTAATAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 16551
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || || | || ||| ||||| || | ||||| ||||| || || || || ||
Sbjct 26553 TGCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCG 26494
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | ||||| |||||||| ||||| | || || | ||| || || || |
Sbjct 26493 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGG 26434
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| ||||| |||||| ||| | | || | || |||| || |
Sbjct 26433 GAATACCCTCCTTATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCA 26374
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || | || |||| ||| || |||| ||| |||||||||||||||||
Sbjct 26373 CCTCCAAGGTAATAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 26325
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || || | || ||| ||||| || | ||||| ||||| || || || || ||
Sbjct 29876 TGCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCG 29817
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | ||||| |||||||| ||||| | || || | ||| || || || |
Sbjct 29816 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGG 29757
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| ||||| |||||| ||| | | || | || |||| || |
Sbjct 29756 GAATACCCTCCTTATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCA 29697
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || | || |||| ||| || |||| ||| |||||||||||||||||
Sbjct 29696 CCTCCAAGGTAATAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 29648
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || || | || ||| ||||| || | ||||| ||||| || || || || ||
Sbjct 41390 TGCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCG 41331
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | ||||| |||||||| |||||| | || || | ||| || || || |
Sbjct 41330 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGCTGGTCTGGGG 41271
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||| ||||| |||||| ||||| | || | || |||| || |
Sbjct 41270 GAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCGA 41211
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || || | || || |||| ||| || ||||||||||||||
Sbjct 41210 CCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCAT 41162
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||| || | ||||| || | ||| || || || ||||||||||| |||
Sbjct 48553 TGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGG 48494
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | || || || |||||||| || |||| || | ||| |||||||| |
Sbjct 48493 CAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAG 48434
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||||| || ||||||| || | | || | || |||| || |
Sbjct 48433 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCA 48374
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || | ||||| | ||| || || | ||| |||||||| || ||||||
Sbjct 48373 CCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGCATA 48324
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||| || | ||| || | ||||| || | ||| || || || ||||||||||| |||
Sbjct 49816 TGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGG 49757
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
| | | | | || || || |||||||| || |||| || | ||| |||||||| |
Sbjct 49756 CAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAG 49697
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | |||||||| || ||||||| || | | || | || |||| || |
Sbjct 49696 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCA 49637
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || | ||||| | ||| || || | ||| |||||||| || ||||||
Sbjct 49636 CCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGCATA 49587
>seq78764
Length=1181
Score = 109 bits (120), Expect = 5e-19
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| || || ||||||||| | | |||| | || |||||||| || |||||| | |||
Sbjct 415 TTCTGGATGTTGTAGTCGGCGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATG 356
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|||||||| ||||||||||| | |||||| || || ||||||| |||| | ||
Sbjct 355 AGACGCTGCTGATCCGGCGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCG 296
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239
| ||||| | | ||||| || || || || | || ||||| || |||||||| ||
Sbjct 295 ATTGTGTCCGAAGACTCAACCTCAAGGGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAT 236
Query 27240 ATTTGCATAGCTGCT 27254
|| ||||| | ||||
Sbjct 235 ATCTGCATCGTTGCT 221
>seq158136
Length=352
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | ||||| ||||| ||||| ||||| ||| | | | || | || ||
Sbjct 229 ACCAAATGCAGGGTAGACTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGGCCATCCTCA 170
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || || ||||||| | || || || || || | ||||||||| ||
Sbjct 169 AGCTGTTTTCCAGCAAAAATGAGCCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCCTGA 110
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | | || | ||||| | | ||| ||||| ||||| || | ||
Sbjct 109 ATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTTTCCACTTCAAGAGTGATTGTCTTT 50
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||||||| || |||||||||||||||||
Sbjct 49 CCCGTCAATGTCTTCACAAAGATTTGCAT 21
>seq54380
Length=3212
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| | | |||| |||| |||||||| || |||
Sbjct 2202 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 2143
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||||||||| ||||||||||| | |||||| || || ||||||| |||
Sbjct 2142 GCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 2083
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223
| | || | ||||| | | ||||| || || || || | ||| |||||
Sbjct 2082 ACATTATCGATTGTGTCCGAAGACTCAACCTCAAGGGTAATGGTTTTCCCCGT 2030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423774147826920
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