Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq205188 127 3e-24
seq222699 122 1e-22
seq12236 91.5 2e-13
seq217650 87.8 2e-12
seq64330 87.8 2e-12
>seq205188
Length=846
Score = 127 bits (140), Expect = 3e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087
|||||||||||||| |||||||||||||| || |||||| || ||||||||||| |||
Sbjct 1 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCC 60
Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147
|| ||||| | |||||| || | ||||| || ||||||||||| ||||| || ||
Sbjct 61 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAG 120
Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAG 130177
|| || || | || ||||| || ||||||
Sbjct 121 GCAAATGCGACGATGCGCTCGGCGAAGGAG 150
>seq222699
Length=2956
Score = 122 bits (134), Expect = 1e-22
Identities = 186/262 (71%), Gaps = 5/262 (2%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| || || || || || || |||||||| || |||||| || || ||||| | ||
Sbjct 655 GTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCC 596
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||| | ||| || |||| || || ||| ||||||||||| ||||| || ||
Sbjct 595 GCGCTTCTTTAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCGACGCA 536
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206
||||| || | ||| ||||| ||||||||| || | | ||| | ||| || ||
Sbjct 535 GGCGAAGGCGACGAGGCGCTCGGCAAAGGAGTCGG---TGGCATCGATCCAGCGCAAGGC 479
Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 130266
||| || ||||| || ||| ||| |||| ||| | | || || || | |||||
Sbjct 478 CCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCTACGGCGCGGAACAGGTGATTCTT 419
Query 130267 TTCTGATGGA-TCTTTGATGTA 130287
||| | |||| |||||||||||
Sbjct 418 TTC-GGTGGAGTCTTTGATGTA 398
>seq12236
Length=17685
Score = 91.5 bits (100), Expect = 2e-13
Identities = 246/369 (67%), Gaps = 12/369 (3%)
Strand=Plus/Minus
Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124
|||||| || ||||| | | | ||| |||||| || || | ||| || || ||
Sbjct 16001 ATCAAACCGTCCTGGTCTCAATAAGGCAGAGTCAAGAATGTCTGCTCTGTTAGTTGCTGC 15942
Query 14125 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184
||||||| |||||| || | ||||| |||||||| || ||||| ||||| ||||
Sbjct 15941 AATGACAATGATGCCAGTATTACCCTCAAAACCATCCATTTCTGTCAAAAGTTGGTTGAG 15882
Query 14185 GGTTTGTTCGCGTTCATCATTCGC---AGGCATACCACCCGCACTGCGTTGCTTACCGAC 14241
||| || || | |||||||||| | | || ||| | || || ||| || ||
Sbjct 15881 GGTCTGCTCTCTTTCATCATTCCCTCCACCAATTCCAGTTCCTCTCTGT--CTT-CCAAC 15825
Query 14242 GGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA--AAG 14299
|| ||||||||||| | || || || || || || || ||| |||| ||
Sbjct 15824 AGCATCAATTTCATCAACAAAGACAATGCAAGGGGCGTTCTCTTTGGC--CTTCTTGAAC 15767
Query 14300 ATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAA 14359
| ||| || |||| ||||| ||||| ||||||||||| ||||| | | | | |
Sbjct 15766 AAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCAG-A 15708
Query 14360 CATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 14418
|||| | || || || || |||||| || || || ||| | |||||||||||
Sbjct 15707 TATTGAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACAGGGTCTTCCC 15648
Query 14419 CGTCCCTGG 14427
|| |||||
Sbjct 15647 AGTTCCTGG 15639
Score = 89.7 bits (98), Expect = 6e-13
Identities = 245/368 (67%), Gaps = 12/368 (3%)
Strand=Plus/Minus
Query 14066 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 14125
||||| || ||||| | | | ||| |||||| || || | ||| || || ||
Sbjct 12131 TCAAACCGTCCTGGTCTCAATAAGGCAGAGTCAAGAATGTCTGCTCTGTTAGTTGCTGCA 12072
Query 14126 ATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATG 14185
||||||| |||||| || | ||||| |||||||| || ||||| ||||| |||| |
Sbjct 12071 ATGACAATGATGCCAGTATTACCCTCAAAACCATCCATTTCTGTCAAAAGTTGGTTGAGG 12012
Query 14186 GTTTGTTCGCGTTCATCATTCGC---AGGCATACCACCCGCACTGCGTTGCTTACCGACG 14242
|| || || | |||||||||| | | || ||| | || || ||| || ||
Sbjct 12011 GTCTGCTCTCTTTCATCATTCCCTCCACCAATTCCAGTTCCTCTCTGT--CTT-CCAACA 11955
Query 14243 GCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA--AAGA 14300
|| ||||||||||| | || || || || || || || ||| |||| || |
Sbjct 11954 GCATCAATTTCATCAACAAAGACAATGCAAGGGGCGTTCTCTTTGGC--CTTCTTGAACA 11897
Query 14301 TATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAAC 14360
||| || |||| ||||| ||||| ||||||||||| ||||| | | | | |
Sbjct 11896 AATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCAG-AT 11838
Query 14361 ATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCC 14419
|||| | || || || || |||||| || || || ||| | |||||||||||
Sbjct 11837 ATTGAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACAGGGTCTTCCCA 11778
Query 14420 GTCCCTGG 14427
|| |||||
Sbjct 11777 GTTCCTGG 11770
>seq217650
Length=1534
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211
||| ||||||||||| |||| || || || ||||| ||||| | ||||| || ||
Sbjct 1178 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCA-- 1121
Query 14212 CATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269
| | | | ||||| | | ||| | || ||||||||||| ||||| |||||||| ||
Sbjct 1120 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 1061
Query 14270 CATGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328
|| ||| || ||| | | | ||||| | ||| | ||| ||| ||||| || ||
Sbjct 1060 CACGGTGCCTTATTCTTCGCCTTC-TCAAACAAATCCCTCACCCTCGACGCACCAACCCC 1002
Query 14329 CACAAACATCTCCACAAA 14346
|||||||| |||||| ||
Sbjct 1001 CACAAACAGCTCCACGAA 984
>seq64330
Length=14123
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211
||| ||||||||||| |||| || || || ||||| ||||| | ||||| || ||
Sbjct 8587 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCA-- 8644
Query 14212 CATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269
| | | | ||||| | | ||| | || ||||||||||| ||||| |||||||| ||
Sbjct 8645 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 8704
Query 14270 CATGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328
|| ||| || ||| | | | ||||| | ||| | ||| ||| ||||| || ||
Sbjct 8705 CACGGTGCCTTATTCTTCGCCTTC-TCAAACAAATCCCTCACCCTCGACGCACCAACCCC 8763
Query 14329 CACAAACATCTCCACAAA 14346
|||||||| |||||| ||
Sbjct 8764 CACAAACAGCTCCACGAA 8781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 616703310874600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |