Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq205188 138 1e-27
seq15189 116 4e-21
seq222699 113 5e-20
seq12236 107 2e-18
seq88322 104 3e-17
seq217650 98.7 1e-15
seq64330 98.7 1e-15
seq177272 91.5 2e-13
seq25689 86.0 7e-12
>seq205188
Length=846
Score = 138 bits (152), Expect = 1e-27
Identities = 120/149 (81%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854
||||| || ||||| || |||||||||| || |||||||| ||||||||||| || |
Sbjct 149 TCCTTCGCCGAGCGCATCGTCGCATTTGCCTGCGTTGAGGGAATCTTCTTCTCCGGAAGC 90
Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
|| ||| | || | ||||||||||| || || ||||||||||| ||| ||||||||||
Sbjct 89 TTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACCTTCTCCAAC 30
Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCA 94943
|| || ||||| || |||||||| |||||
Sbjct 29 GAACTCATCTCCCGCGACGAGGGTCTCCA 1
>seq15189
Length=5727
Score = 116 bits (128), Expect = 4e-21
Identities = 158/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 104148 ACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACGGCTCGATGGT 104206
||| || |||||||||| ||||||||||| ||| | ||| || | || || || | |
Sbjct 1524 ACTATGATTATTTTGGTTTCAAAACCCTTAAGAGGTCCTACCTCTTAAAGGTTCAAGGTA 1583
Query 104207 GTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAA 104266
||| |||||| ||||| ||||||| ||| | || || | || |||||| ||||
Sbjct 1584 AGGTTG-TGGAAAGACCACAACACATGTTGATGAGGGTTGCTGTTGGAATTCATAAGGAA 1642
Query 104267 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCA 104326
|||||||| |||| | | || ||| || |||||| ||| | ||||| ||| |||
Sbjct 1643 GACATTGACTCTGCTGTCAAAACTTACCACCTGATGTCTCAACGGTGGTTCACTCATGCA 1702
Query 104327 ACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCA 104364
| ||||| || |||||||| || ||||| ||||| ||
Sbjct 1703 TCTCCAACTCTTTTCAATGCGGGAACACCTAGACCACA 1740
>seq222699
Length=2956
Score = 113 bits (124), Expect = 5e-20
Identities = 115/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854
|||||||| ||||| ||| |||| || || || || ||||| ||||||||||| || |
Sbjct 506 TCCTTTGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGC 565
Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
|||||| | || | |||||| |||||||| || | ||||| || ||| ||||||||||
Sbjct 566 TTCTGCTCGATATTTTGGCTAAAGAAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAAC 625
Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|| || || || || || || || || |||
Sbjct 626 GAACTCATATCGCGAGATGAAGGGCTTCAC 655
>seq12236
Length=17685
Score = 107 bits (118), Expect = 2e-18
Identities = 277/416 (67%), Gaps = 12/416 (3%)
Strand=Plus/Minus
Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616
||||| || || | | || || || || ||||||| || || || | | ||||||
Sbjct 12101 TCAAGAATGTCTGCTCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 12042
Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676
|||||||| ||||||||||||||||| | || || || | |||||||||| || |
Sbjct 12041 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 11985
Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733
||| |||| | | || |||| || |||||||| ||||||| ||||| |||||
Sbjct 11984 CCAATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 11925
Query 9734 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791
|| | ||| | | |||| || | ||| || || || || || |||||||
Sbjct 11924 GG--GGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 11867
Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850
|||||||||| ||||| | | | | | |||| | || || ||| || ||||||
Sbjct 11866 CAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAATGGAACACCAGCTTCACCA 11808
Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910
||||| || ||| | || ||||| || || ||||| ||| | || || | |||
Sbjct 11807 GCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 11748
Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966
|| || || ||| || | | |||||||| | ||| ||||| |||||
Sbjct 11747 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCAC 11692
Score = 107 bits (118), Expect = 2e-18
Identities = 277/416 (67%), Gaps = 12/416 (3%)
Strand=Plus/Minus
Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616
||||| || || | | || || || || ||||||| || || || | | ||||||
Sbjct 15970 TCAAGAATGTCTGCTCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 15911
Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676
|||||||| ||||||||||||||||| | || || || | |||||||||| || |
Sbjct 15910 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 15854
Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733
||| |||| | | || |||| || |||||||| ||||||| ||||| |||||
Sbjct 15853 CCAATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 15794
Query 9734 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791
|| | ||| | | |||| || | ||| || || || || || |||||||
Sbjct 15793 GG--GGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 15736
Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850
|||||||||| ||||| | | | | | |||| | || || ||| || ||||||
Sbjct 15735 CAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAATGGAACACCAGCTTCACCA 15677
Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910
||||| || ||| | || ||||| || || ||||| ||| | || || | |||
Sbjct 15676 GCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 15617
Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966
|| || || ||| || | | |||||||| | ||| ||||| |||||
Sbjct 15616 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCAC 15561
>seq88322
Length=2502
Score = 104 bits (114), Expect = 3e-17
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTA--TCTTCAAC 104195
|| |||| ||||| || ||||||||| ||||||||||||||| | || |||| ||
Sbjct 682 AGGGACTTCGACTATGATTATTTTGGGTTCAAAACCCTTGAGAGGTCTTACCTCTTGAA- 740
Query 104196 GGCTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTA 104255
|| || | || ||| |||||| || || ||||||| ||| | || || | || |
Sbjct 741 GGTTCAAGGGAAGGTTG-TGGAAAGGCCGCAACACATGTTGATGAGAGTCGCGGTTGGGA 799
Query 104256 TTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGT 104315
|||| ||| ||||| || |||| | | || ||| ||| |||||| ||| | ||
Sbjct 800 TTCACAAGGATGACATAGACTCTGCTGTTAAAACTTACCACATGATGTCTCAACGATGGT 859
Query 104316 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAA 104365
||| |||||| | || || || ||||||||||| || || || || |||
Sbjct 860 TCACCCACGCATCTCCTACTCTTTTCAATGCTGGAACTCCTAGGCCTCAA 909
>seq217650
Length=1534
Score = 98.7 bits (108), Expect = 1e-15
Identities = 249/372 (67%), Gaps = 14/372 (4%)
Strand=Plus/Minus
Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9670
||| ||||||||||| |||| ||| |||||||| || ||||||| ||||| || | |
Sbjct 1178 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 1119
Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730
|| | || || | | ||| | |||||||| ||||||||||||||||| || |||
Sbjct 1118 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 1061
Query 9731 CATGGT---TGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 9786
|| ||| | ||| ||||| | ||||| | ||||| || | | || || ||
Sbjct 1060 CACGGTGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 1005
Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846
|| ||||||| |||||| || | | || | || || || || ||| | |||
Sbjct 1004 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACACCCGCTTC 945
Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906
|| || | || | || ||||| ||||| || || || || ||| | | || | |
Sbjct 944 CCCAGCCACAGCCCTAGCCAGAAGCGTCTTCCCGGTTCCCGGTGGTCCCACCA-GAAGAC 886
Query 9907 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 9965
||| | | |||||||| || || || ||| | ||||| | ||| | |||||| |
Sbjct 885 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 826
Query 9966 CAATTTCTTCCA 9977
||| |||| ||
Sbjct 825 CAACCTCTTGCA 814
>seq64330
Length=14123
Score = 98.7 bits (108), Expect = 1e-15
Identities = 249/372 (67%), Gaps = 14/372 (4%)
Strand=Plus/Plus
Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9670
||| ||||||||||| |||| ||| |||||||| || ||||||| ||||| || | |
Sbjct 8587 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 8646
Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730
|| | || || | | ||| | |||||||| ||||||||||||||||| || |||
Sbjct 8647 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 8704
Query 9731 CATGGT---TGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 9786
|| ||| | ||| ||||| | ||||| | ||||| || | | || || ||
Sbjct 8705 CACGGTGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 8760
Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846
|| ||||||| |||||| || | | || | || || || || ||| | |||
Sbjct 8761 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACACCCGCTTC 8820
Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906
|| || | || | || ||||| ||||| || || || || ||| | | || | |
Sbjct 8821 CCCAGCCACAGCCCTAGCCAGAAGCGTCTTCCCGGTTCCCGGTGGTCCCACCA-GAAGAC 8879
Query 9907 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 9965
||| | | |||||||| || || || ||| | ||||| | ||| | |||||| |
Sbjct 8880 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 8939
Query 9966 CAATTTCTTCCA 9977
||| |||| ||
Sbjct 8940 CAACCTCTTGCA 8951
>seq177272
Length=479
Score = 91.5 bits (100), Expect = 2e-13
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9615
|||||| || ||| | | || || || || ||||||| ||||| || | | |||||
Sbjct 353 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCGGTATTACCCTCAAA 412
Query 9616 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9670
|||||||| ||||||||||||||||||| || ||||| | |||||||||| ||
Sbjct 413 TCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTCTGTTCTCTTTCATCATTCCCT 467
>seq25689
Length=4009
Score = 86.0 bits (94), Expect = 7e-12
Identities = 189/279 (68%), Gaps = 6/279 (2%)
Strand=Plus/Minus
Query 9691 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 9750
|||| |||| || |||||||| ||||||| || || |||||||| ||| || ||
Sbjct 4002 TTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCATGGAGCATTCTCTTTGGC 3943
Query 9751 GACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAG 9808
|||| || | ||| || || || || || |||||||||||||||||||||||
Sbjct 3942 --CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAACAAACATCTCCACAAAC 3885
Query 9809 TTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAG 9867
| | | | | |||| || || |||||| | |||||| ||||| || || |
Sbjct 3884 TCAGAACCTG-AGATTGAGAAAAATGGGACACCTGCTTCACCTGCAATAGCCTTTGCTAA 3826
Query 9868 AAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||| ||||| || || || || ||| | || || ||||| ||| || || ||
Sbjct 3825 AAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCTTTTGGTATGCGAGCCCC 3766
Query 9928 ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966
| || | |||||||||| | |||||||| |||||
Sbjct 3765 AACAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCAC 3727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 581627414583400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |