Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq66253 98.7 5e-16 >seq66253 Length=8278 Score = 98.7 bits (108), Expect = 5e-16 Identities = 145/199 (73%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAA-ATTAATATTGTTTGAACCAATAAAATT 65145 || || ||||| ||||||||||| |||| || ||| | ||||| ||| | ||||| Sbjct 5432 CGAGTACCAAATTGACCATTTGG-TTTAAGAAGATTGACGTTGTTGCTACCCACAAAATC 5490 Query 65146 CTGAGCCATTCCGATAATTGCTGC-ATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204 || ||||| |||||||| ||| | |||||| ||||| ||||| || | |||| Sbjct 5491 TTGTGCCATATTGATAATTG-TGCTAGATAAACTTTGCTCACCATGATGGTAAGCAGAAT 5549 Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264 | ||||| ||||| ||| |||| || || ||||||||||| | || ||||| |||| Sbjct 5550 GCTCAGACACATAACCAATAAACTGGGCTACTTTTATTTCTTTGAACAATTTCTTCTTAA 5609 Query 65265 AT--GCAGAATACAATATT 65281 || |||||| | ||| || Sbjct 5610 ATGAGCAGAACAGAATCTT 5628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235036493067750