Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq66253 98.7 5e-16
>seq66253
Length=8278
Score = 98.7 bits (108), Expect = 5e-16
Identities = 145/199 (73%), Gaps = 6/199 (3%)
Strand=Plus/Plus
Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAA-ATTAATATTGTTTGAACCAATAAAATT 65145
|| || ||||| ||||||||||| |||| || ||| | ||||| ||| | |||||
Sbjct 5432 CGAGTACCAAATTGACCATTTGG-TTTAAGAAGATTGACGTTGTTGCTACCCACAAAATC 5490
Query 65146 CTGAGCCATTCCGATAATTGCTGC-ATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204
|| ||||| |||||||| ||| | |||||| ||||| ||||| || | ||||
Sbjct 5491 TTGTGCCATATTGATAATTG-TGCTAGATAAACTTTGCTCACCATGATGGTAAGCAGAAT 5549
Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264
| ||||| ||||| ||| |||| || || ||||||||||| | || ||||| ||||
Sbjct 5550 GCTCAGACACATAACCAATAAACTGGGCTACTTTTATTTCTTTGAACAATTTCTTCTTAA 5609
Query 65265 AT--GCAGAATACAATATT 65281
|| |||||| | ||| ||
Sbjct 5610 ATGAGCAGAACAGAATCTT 5628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235036493067750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |