Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq375 98.7 8e-16 >seq375 Length=1023 Score = 98.7 bits (108), Expect = 8e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 29960 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 30019 ||||| ||| || || | |||| ||||||||| ||||| || ||||| |||||| Sbjct 806 ATCATCATCGTCAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGAACATGTCG 865 Query 30020 CCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATG 30079 | | |||||||||||| || ||||||| ||||||| ||||| ||||| ||| Sbjct 866 GCGCTGCGCTGGTAGAGCTGGCAGGAGAGCTTTCCGTCGGCGACGTAGAACTGGAACAGT 925 Query 30080 GCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATG 30139 ||||||||||| | || |||||| | ||| ||| ||||||||| | |||| Sbjct 926 GCGTGGCACGGTGCGAGGGCCATGTCCGGGATGTCCGCGGGATTCCAGGCGGAGACGAGC 985 Query 30140 ATGCGCC 30146 | ||||| Sbjct 986 AGGCGCC 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405200999291220