Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_028778.1 Length=75626 Score E Sequences producing significant alignments: (Bits) Value seq21506 86.0 3e-12 >seq21506 Length=5703 Score = 86.0 bits (94), Expect = 3e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 55434 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCCGGCGTGGCGGTCGCTCAG 55493 |||||||||||||| || || || ||| | | | | | ||| || |||| || | Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCGAAC 5276 Query 55494 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAA-GCAGACGAACGAGTGGGAGGACGG 55552 ||| | | || || || || ||||| ||| || || | ||||||||||| ||||||| Sbjct 5275 TTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCG-CGAACGAGTGGAAGGACGG 5217 Query 55553 CGAAACCGTGTTCCTCCGTACGTCGGTGTGGCGCGAGCTTGCAGAGGGCGCGGC 55606 |||| | |||||||||| | ||||||||||| ||| | || ||| || ||| Sbjct 5216 CGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGC 5163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241217968791745