Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq26502 298 2e-76
>seq26502
Length=2726
Score = 298 bits (330), Expect = 2e-76
Identities = 352/473 (74%), Gaps = 4/473 (1%)
Strand=Plus/Minus
Query 38463 GAGGGTGTCGCCCCTGGCCAGCAGCTCGTAGGTTGCCGGGTCGTCCAGCGGGATGTTCTC 38522
||| |||||||| | ||||||||| |||||| || |||||||| || || || |||
Sbjct 2297 GAGCGTGTCGCCGCGGGCCAGCAGTTCGTAGACGGCGGGGTCGTCGAGACCGAGGTGCTC 2238
Query 38523 GATGTCGACGTGCTCACCACGGTTGCGGCGGATGTTCTCGACCGCGTCGCCCATGATCGT 38582
|| |||| | ||| || ||||| ||||||||| |||| |||||| ||||||||
Sbjct 2237 GAGATCGAGCTCCTCGCCCCGGTTCATGCGGATGTTGTCGAGCGCGTCCGAGATGATCGT 2178
Query 38583 GAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGGGCCTCGCAGCTCGGGTA 38642
|||||||||||| || |||||||||||||| | ||| || |||| |||||| ||| ||
Sbjct 2177 GAGGTTCCGGAGGCCCAGGAAGTCCATCTTGATCAGACCGAGGGACTCGCACGACGGATA 2118
Query 38643 GTCGAACTGCGTGATCGTCACGCCGTCC-GCAGGCCGCACCCACG-TAGGGATGTGGTCG 38700
|||||||||||||| || |||||| || || || || | | |||||| ||||
Sbjct 2117 GTCGAACTGCGTGACGATCTGACCGTCCTGCTCGC--GACGCATGATCGGGATGATGTCG 2060
Query 38701 ACCAGCGGCTCGTCAGACATGATCACACCGGCTGCGTGCACGCCCATCTGCCGGACGAGT 38760
| ||| |||||| |||||||| || ||||| |||||||||||| |||||| ||
Sbjct 2059 AGCAGGGGCTCGGACGACATGATGACGCCGGCGGCGTGCACGCCCCACTGCCGCTTCAGC 2000
Query 38761 CCTTCGAGGCCACGCGCGAGGTCGATGACCTCCTTCGCGTCCTTGTCGTTCTCGTACAGC 38820
|| |||||||| ||||| |||||| |||| |||||| || |||| ||||| ||
Sbjct 1999 CCCTCGAGGCCGAGCGCGCGGTCGAAGACCGTCTTCGCCTCGGGGTCGGTCTCGATGAGA 1940
Query 38821 GCCCGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCCGGGTTGGTGATGCCCTCCAGG 38880
||||||| ||||| |||||| | ||||||||||||| | | || | ||||| || |||
Sbjct 1939 GCCCGGAACTCGCTCGCCTCCTTGTAGCGCGGGTGCGCGGAGTCGAACATGCCGTCGAGG 1880
Query 38881 GGCATCGACGCGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCC 38933
||||| | ||||| ||| | | || ||||||||| ||| ||| ||
Sbjct 1879 GGCATGTCCTTCCCCATGACGGCCGGGGGCATCGCCTTGGTGAGCCGCTCTCC 1827
Score = 178 bits (196), Expect = 4e-40
Identities = 314/449 (70%), Gaps = 9/449 (2%)
Strand=Plus/Minus
Query 39624 CTGGACGCACAGCAGGGCGTCGTGGGCCGCAGCCTCCTCGACCCGCGTGTAGTGCGAGTC 39683
||| |||||||||||||| ||||||| | ||||| | | ||||||||||||||
Sbjct 973 CTGCACGCACAGCAGGGCCGCGTGGGCGTCGGCCTCGTGCTGGTGGGTGTAGTGCGAGTC 914
Query 39684 GTTGGTGACCACCGGGGTGAGACCGAGGCGCTGACCGAGGCGGTAGAGGTC-GTCGCGGA 39742
|||||| |||| | | || |||||| | |||| || || || ||| | |
Sbjct 913 GTTGGTCGCCACGAGCGGGATGCCGAGGTCTTTCGCGAGACGCAGCAGATCCGTCATG-A 855
Query 39743 CGCGCCGCTCGATCTCCAGGCCGTGGTCCATGATCTCCAGGAAGAAGTTGTCCTTCCCGA 39802
| || ||||||||| ||||||||||||||||||||| |||| |||| ||||| ||||
Sbjct 854 CCCGGCGCTCGATCGACAGGCCGTGGTCCATGATCTCGGCGAAGTAGTTCTCCTTGCCGA 795
Query 39803 AGATCTCCCGCCACTTCGCGGCCTCGGCGACGGCCTCCTCGTACTGGCCGAGGTTGAGCC 39862
|||| ||| | ||| ||| || | ||| ||| | |||||||||||||| ||||
Sbjct 794 AGATGTCCTGGAACTCCGCTGCGGCCGCGCGGGCGGCGTCGTACTGGCCGAGCCGCAGCC 735
Query 39863 GGGTCATCACTGCGCCACCGGGGCATCCCGTGGTGCCGATCAGGCCCTCTGCGTGCTCCG 39922
| ||| ||| | || ||||| ||||| ||| |||| || |||| ||| | |
Sbjct 734 GCGTCTGCACCTCTCCGGACGGGCACCCCGTCGTGGCGATGAGCCCCTTGCCGTACGTCT 675
Query 39923 CCACCAGCTCGGCGTCCATGCGCGGGTACTTCCCG-AGCAGGCCCTCGCTGTACGAGCGA 39981
| ||||||| |||||| ||||| ||| | || | ||||| || ||| |
Sbjct 674 GGAGCAGCTCGCGGTCCATACGCGG---CTTGAAGTAGTA-CCCCTCCATGCTCGACAGC 619
Query 39982 GAGGAGAGCTTGAACAGGTTGTGCAGGCCGGTCTTGTTCGTGGC-GAGCATGGTCATGTG 40040
||| ||| ||| |||||||||| ||| | || || |||| ||||||||||||
Sbjct 618 GAGCTCAGCCGGAAGAGGTTGTGCATGCCCTCCGTGCTC-TGGCTCCACATGGTCATGTG 560
Query 40041 GGTGTAGGCACCCCGACCGCTCACGTCGT 40069
|||||| || ||| ||| ||||||||
Sbjct 559 GGTGTACGCGCCCGAACCCGACACGTCGT 531
Score = 178 bits (196), Expect = 4e-40
Identities = 161/200 (81%), Gaps = 12/200 (6%)
Strand=Plus/Minus
Query 38111 CGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTG---CCCATGGCGCGACGGAGGAGGT 38167
|| ||| |||| ||||| |||| ||||||||| ||||| || || || |||| ||
Sbjct 2718 CGTACTGCTTGTCCAGC---TCGGACTTCTTCTTCTTTCCCATCGCTCGGCGCAGGATGT 2662
Query 38168 CGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGC---CGCCTTCTGCACCTGCTCCT 38224
| |||||||||||| || ||||||||| ||||||| |||| | ||||||||||
Sbjct 2661 CAGCCTGACCGAGGCTGAACCCGGCCACCTTCTGCGCGATCGCCATG---ACCTGCTCCT 2605
Query 38225 GGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGG 38284
||||||||||||||||| ||| | |||||||||||||| ||||||||| ||| |||||
Sbjct 2604 GGTAGATGATGAGCCCGTAGGACTCCTCCAGGATCTCGGCGAGCGGCTCCGCCAGCTCGG 2545
Query 38285 GGTGGATCGGCGTGATCTCC 38304
|||||||||| |||||||||
Sbjct 2544 GGTGGATCGGGGTGATCTCC 2525
Score = 147 bits (162), Expect = 7e-31
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 39074 GGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCT 39133
|||| |||||||||| ||| | ||||||||| || || || || ||||| ||||||||||
Sbjct 1622 GGTCGTCGAAGTCGACGTCGAAGTCGGGCATCGACACGCGGTCCGGGTTGAGGAACCGCT 1563
Query 39134 CGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCA 39193
||||||| || ||||| || ||||| |||||||||||| | || || ||| |||
Sbjct 1562 CGAAGATCAGACCGTGCTCGAGAGGGTCGAGGTCGGTGATCTTCATCGCATAGGCGACCA 1503
Query 39194 GCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAG 39252
||| || || | ||||||||||| || ||||||| | |||||| ||||| ||||||
Sbjct 1502 TCGAACCCGCACCGGAGCCGCGCCCCGGACCGACCCGGATGCCGTTGTCCTTGGCCCAG 1444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159290291186370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |