Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq78941 192 3e-44 >seq78941 Length=653 Score = 192 bits (212), Expect = 3e-44 Identities = 229/311 (74%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637 || ||||| | ||||| || ||| |||||| || | ||| || | ||||||||| ||| Sbjct 333 CTGCACGCCATCGCCAACGCCCAGCGGGCCGGCGGTATCGCGGCATTCATCGACGCGGAG 392 Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697 || | || ||||| || |||||| | |||||| || ||| ||||| ||| | || Sbjct 393 CATGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACGCCCTTCTCGTC 452 Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66757 |||||||| || || |||||||| || ||||||| ||| | ||||| || || Sbjct 453 TCGCAGCCCGACACGGGTGAGCAGGCTCTCGAGATCGCCGACATGCTCGTGCGCTCCGGT 512 Query 66758 GAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66817 | | | || ||||||| ||||| |||||||||||||||||||| || ||| |||| Sbjct 513 GCCATCGACCTCATCGTCGTCGACTCGGTGGCGGCCCTGGTGCCGCGTGCGGAGATCGAG 572 Query 66818 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGC 66877 ||||| || || ||| ||||| || || || || ||||||||||| ||||| |||| Sbjct 573 GGCGAGATGGGAGACTCCCACGTGGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGG 632 Query 66878 AAGCTCACTGG 66888 |||||||| || Sbjct 633 AAGCTCACCGG 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242197686420690