Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_028946.1
Length=59652
Score E
Sequences producing significant alignments: (Bits) Value
seq24349 527 2e-145
seq73813 95.1 5e-15
>seq24349
Length=3626
Score = 527 bits (584), Expect = 2e-145
Identities = 597/794 (75%), Gaps = 11/794 (1%)
Strand=Plus/Minus
Query 45236 GTGATGCTCGGGCAAGGCATGAACCTGCAGCAGGCCCACACCTGTGTGTACATCGGCATC 45295
||||||||||| || |||||||||||||||||||| ||||| || | | ||||| ||
Sbjct 2299 GTGATGCTCGGCCAGGGCATGAACCTGCAGCAGGCGCACACGGCCGTCTTCGTCGGCGTC 2240
Query 45296 ACGCACAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACC 45355
|| |||| |||||||| |||||| | ||||||| || ||||| ||||| || |
Sbjct 2239 ACCTACAAATTCAACGACACGATCCAGGCCGTGCACCGCATCCAGCGCTTCGGACAG-CA 2181
Query 45356 CATC-CCTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCAT 45414
| | ||||| | | || ||||| || ||||||||||| || | | || | ||
Sbjct 2180 GAGCACCTGCGACGTGCACCTGATCTACGCCGAAACCGAGTCCGA---GATCCGCGACAC 2124
Query 45415 CCGC---GAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCA 45471
|| | | ||| |||| | | ||| || | || || |||| |||| | || |
Sbjct 2123 CCTCCTGGCGAAGTGGGAAGAGCACGACCAGCTCACCGACACCATGAGCGACGTGATCCG 2064
Query 45472 TGAGTACGGACTTGACCCCGAAGCGATCTCCGAGGCGCTGCAACGCTCCATCGGATGTGA 45531
|||| |||||| |||||| |||||||||| || || ||| |||| || ||
Sbjct 2063 CGAGTTCGGACTCAACCCCGCCGCGATCTCCGCCGCACTCACCCGCGCCATGGGCGTCGA 2004
Query 45532 GCGCATCGAAGCATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAAC 45591
|||| ||||||||||||| || ||| | |||| |||||||||||| ||| ||
Sbjct 2003 GCGCGTCGAAGCATCCGGGCCCGGCTGGACGCTCGCGCTCAACGACTGCGTGATCGAGAC 1944
Query 45592 CAA-GAGCA--TGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAA 45648
| || || |||| || || || || ||||| ||||| || |||||||| ||
Sbjct 1943 CCGCGACCACATGGCCACGGACTCCGTCGACCTGATCGTCACGTCGATCCCGTTCTCGAA 1884
Query 45649 CCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGAGCACTT 45708
||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1883 CCACTACGAGTACACCCCCAGCTACAACGACTTCGGCCACACCGACGACAACCTGCACTT 1824
Query 45709 CTGGCAGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCGCCGGGCCGTAT 45768
|||||||||||||||||||||||| ||| |||| ||||| | || || || || ||
Sbjct 1823 CTGGCAGCAGATGGACTACCTCACTCCGGAGCTCCTGCGGGTGCTGCGTCCAGGACGGAT 1764
Query 45769 CTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCC 45828
||| ||||||||||| ||||| || ||| |||||| ||||||||||| |||||| | ||
Sbjct 1763 CTATGCCTGCCACGTGAAGGATCGAATCCAGTTCGGCAACGTCACCGGAGCCGGCATCCC 1704
Query 45829 CACGGTGTCCCCGTTCCACGCCGAGGCGATCTTCCACGGACGCAAACACGGCTTCGACTA 45888
||| || || |||||||||||||| ||| || ||||| | ||| || |||||||||||
Sbjct 1703 CACCGTCTCACCGTTCCACGCCGAAGCGCTCGCGCACGGCCTCAAGCATGGCTTCGACTA 1644
Query 45889 CCTCGGCATGATCACCGTCGTCACCGATGTGGTCCGGGAAAACAACCAGACGTACCGGCT 45948
| | ||||||||||||||| |||||| || || || || ||||||||||| ||||| ||
Sbjct 1643 CATGGGCATGATCACCGTCACCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCT 1584
Query 45949 GGGCTGGTCCGAGCAGTGCAAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACAT 46008
|||| | ||| | |||| |||| ||| ||||||||||||||||| || || |||||
Sbjct 1583 CGGCTACGCGGAGATGCGCAAGGACGGCACGAAGATGGGCGTCGGCTCACCCGAGTACAT 1524
Query 46009 TCTGCTGTTCCACA 46022
||||| |||||||
Sbjct 1523 CCTGCTCTTCCACA 1510
Score = 143 bits (158), Expect = 1e-29
Identities = 176/237 (74%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44467 CGGAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGAC-ACTG- 44524
||| ||||| |||| ||||| ||||| || |||||||| | | ||| | || |
Sbjct 3194 CGGCATCTACGTCACGAACTACGAGAGCGTGCGCGACGGCCGCCTCG--CCGTCGACGGC 3137
Query 44525 TTCACGGCCGTTTCACTCGACGAAGCGAGCGTGCTGCGCTCGTTCGGGTCTAAGACGTAC 44584
||| || || |||||||| || |||||||||||| ||||| || ||||| |||
Sbjct 3136 TTCGACGCGGTCAGCCTCGACGAGGCATCCGTGCTGCGCTCCTTCGGATCGAAGACCTAC 3077
Query 44585 CAGTCGTTCCTGGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCGACGGCCACGCCA 44644
||| |||||| | |||||||||| | | || ||||| | ||| || || || |||||
Sbjct 3076 CAGGAGTTCCTCGGCCTGTTCGACGAGATCCCGTACCGCTTCGTGGCCACCGCGACGCCG 3017
Query 44645 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGTTATCTCGGGGTGATGGAC 44701
|| || |||||| |||||||||||||||||||||| || | ||||| | ||||||
Sbjct 3016 TCACCCAACCGGCACAAGGAGCTGATCCACTACGCCGGGTTCCTCGGCCTCATGGAC 2960
>seq73813
Length=1303
Score = 95.1 bits (104), Expect = 5e-15
Identities = 127/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 35136 GTTGCCAAGGACGTGTGCGAGGCCGCCGGTATCTCGAAGTACCGGGACGCGATCGTTCAG 35195
|| || ||||| |||||||| | ||| ||| | ||||| || ||||| ||| |||
Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATCGCCAAGTATCGCGACGCCTTCGCGCAG 118
Query 35196 TTGGACGACGACGAAAGGGTGTACCTGTTCGTGGACACCCCTGGTGGTCCTCAGCGGATG 35255
| |||| ||||||||||| || | | ||||||||||| ||| || | |||| ||||
Sbjct 117 CTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGATG 58
Query 35256 GTCGCGGTCACTGAGGCTGGTGTGTGGTCGCTGTTGATGATCAGCCGGTCTCCGAAG 35312
| |||| ||| | ||||||| ||||| || | ||||| || || ||||||
Sbjct 57 ACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGAAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190257286345380
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