Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_028961.1 Length=55094 Score E Sequences producing significant alignments: (Bits) Value seq73813 98.7 3e-16 >seq73813 Length=1303 Score = 98.7 bits (108), Expect = 3e-16 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 34854 GTTGCCAAGGACGTGTGCGAGGCCGCCGGTATCTCGAAGTACCGGGACGCGATCGTTCAG 34913 || || ||||| |||||||| | ||| ||| | ||||| || ||||| ||| ||| Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATCGCCAAGTATCGCGACGCCTTCGCGCAG 118 Query 34914 TTGGACGACGACGAAAGGGTGTACCTGTTCGTGGACACCCCTGGTGGTCCTCAGCGGATG 34973 | |||| ||||||||||| || | | ||||||||||| ||| || | |||| |||| Sbjct 117 CTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGATG 58 Query 34974 GTCGCGGTCACTGAGGCTGGTGTGTGGTCGCTGTTGATGATTAGTCGGTCGCCGAAG 35030 | |||| ||| | ||||||| ||||| || | || ||||| ||||||||| Sbjct 57 ACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175710490103520